RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SREBF1P36956 1147 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 ARHGAP4P98171 946 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 TRIM71Q2Q1W2 868 aaKnown RBP22.91■■□□□ 1.26
LRCH3-208ENST00000443727 MCTP2Q6DN12 878 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 REXO1Q8N1G1 1221 aaKnown RBP22.91■■□□□ 1.26
LRCH3-208ENST00000443727 CYP2W1Q8TAV3 490 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 RNF26Q9BY78 433 aaPredicted RBP22.91■■□□□ 1.26
LRCH3-208ENST00000443727 YBX2Q9Y2T7 364 aaKnown RBP22.91■■□□□ 1.26
LRCH3-208ENST00000443727 PCDHA11Q9Y5I1 949 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 TANC1Q9C0D5 1861 aa22.91■■□□□ 1.26
LRCH3-208ENST00000443727 TRIP12Q14669 1992 aaPredicted RBP22.9■■□□□ 1.26
LRCH3-208ENST00000443727 DOCK5Q9H7D0 1870 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 GSTTP1A0A1W2PQM5 241 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 ESYT2A0FGR8 921 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 CPLX1O14810 134 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 NBNO60934 754 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 CLK2P49760 499 aaKnown RBP22.9■■□□□ 1.26
LRCH3-208ENST00000443727 EVCP57679 992 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 TOB2Q14106 344 aaPredicted RBP22.9■■□□□ 1.26
LRCH3-208ENST00000443727 PKN1Q16512 942 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 CNKSR3Q6P9H4 555 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 TRIM22Q8IYM9 498 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 PHOSPHO2Q8TCD6 241 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 ZMYND12Q9H0C1 365 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 PDRG1Q9NUG6 133 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 ERAP1Q9NZ08 941 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 SLC9A2Q9UBY0 812 aa22.9■■□□□ 1.26
LRCH3-208ENST00000443727 EMSYQ7Z589 1322 aa22.89■■□□□ 1.26
LRCH3-208ENST00000443727 RSPH10B2B2RC85 870 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 RSPH10BP0C881 870 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 ARP10275 920 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 IFNAR1P17181 557 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 MARK3P27448 753 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 HOXC8P31273 242 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 GPNMBQ14956 572 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 PPP2R2DQ66LE6 453 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 CCDC148Q8NFR7 591 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 BICD2Q8TD16 824 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 GAS2L1Q99501 681 aaPredicted RBP22.89■■□□□ 1.25
LRCH3-208ENST00000443727 SMARCAD1Q9H4L7 1026 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 AZI2Q9H6S1 392 aa22.89■■□□□ 1.25
LRCH3-208ENST00000443727 NRCAMQ92823 1304 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 KIF28PB7ZC32 967 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 CXCL10P02778 98 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 MYOGP15173 224 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 PPFIA1Q13136 1202 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 NTRK3Q16288 839 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 LMBR1Q8WVP7 490 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 LARP6Q9BRS8 491 aaKnown RBP22.88■■□□□ 1.25
LRCH3-208ENST00000443727 PRDM12Q9H4Q4 367 aa22.88■■□□□ 1.25
LRCH3-208ENST00000443727 AGO4Q9HCK5 861 aaKnown RBP22.88■■□□□ 1.25
LRCH3-208ENST00000443727 MEIS1O00470 390 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 CTSHP09668 335 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 SSRP1Q08945 709 aaKnown RBP22.87■■□□□ 1.25
LRCH3-208ENST00000443727 STK3Q13188 491 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 IKBKEQ14164 716 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 CPLX2Q6PUV4 134 aaKnown RBP22.87■■□□□ 1.25
LRCH3-208ENST00000443727 TRAF7Q6Q0C0 670 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 PLA2G4DQ86XP0 818 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 HERC6Q8IVU3 1022 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 ZNF274Q96GC6 653 aaPredicted RBP22.87■■□□□ 1.25
LRCH3-208ENST00000443727 VPS54Q9P1Q0 977 aa22.87■■□□□ 1.25
LRCH3-208ENST00000443727 NFASCO94856 1347 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 ABHD14A-ACY1A0A1B0GW23 586 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 EFCAB14O75071 495 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 CAND2O75155 1236 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 LGR5O75473 907 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 ACTR2P61160 394 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 WDR5P61964 334 aaKnown RBP22.86■■□□□ 1.25
LRCH3-208ENST00000443727 NIPA1Q7RTP0 329 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 ZBED2Q9BTP6 218 aa22.86■■□□□ 1.25
LRCH3-208ENST00000443727 DDX39AO00148 427 aaKnown RBP22.85■■□□□ 1.25
LRCH3-208ENST00000443727 CA3P07451 260 aa22.85■■□□□ 1.25
LRCH3-208ENST00000443727 NLRP5P59047 1200 aa22.85■■□□□ 1.25
LRCH3-208ENST00000443727 ITGB3BPQ13352 177 aaPredicted RBP22.85■■□□□ 1.25
LRCH3-208ENST00000443727 MBTPS1Q14703 1052 aa22.85■■□□□ 1.25
LRCH3-208ENST00000443727 GRIK4Q16099 956 aa22.85■■□□□ 1.25
LRCH3-208ENST00000443727 TNPO1Q92973 898 aaKnown RBP22.85■■□□□ 1.25
LRCH3-208ENST00000443727 TRPC6Q9Y210 931 aa22.85■■□□□ 1.25
LRCH3-208ENST00000443727 TET1Q8NFU7 2136 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 FAM86B1E9PN63 330 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 TLL1O43897 1013 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 CYP3A4P08684 503 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 FAM86B2P0C5J1 330 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 RSPH3Q86UC2 560 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 RASGRP4Q8TDF6 673 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 SH3GLB2Q9NR46 395 aa22.84■■□□□ 1.25
LRCH3-208ENST00000443727 BACH1O14867 736 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 ADAMTS3O15072 1205 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 EIF5BO60841 1220 aaKnown RBP22.83■■□□□ 1.25
LRCH3-208ENST00000443727 IGFBP4P22692 258 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 IGBP1P78318 339 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 ADAM17P78536 824 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 TAF2Q6P1X5 1199 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 UIMC1Q96RL1 719 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 ZNF577Q9BSK1 485 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 TCEAL9Q9UHQ7 104 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 TUBE1Q9UJT0 475 aa22.83■■□□□ 1.25
LRCH3-208ENST00000443727 IPO5O00410 1097 aaKnown RBP22.82■■□□□ 1.24
LRCH3-208ENST00000443727 DEXIO95424 95 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms