RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PSMD10O75832 226 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 TCF7P36402 384 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 ACTR2P61160 394 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 ZNF200P98182 395 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 MFSD10Q14728 455 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 GDF6Q6KF10 455 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 NEK8Q86SG6 692 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 SESTD1Q86VW0 696 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 POTEDQ86YR6 584 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 CCDC60Q8IWA6 550 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 TOX2Q96NM4 488 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 JPH1Q9HDC5 661 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 HDAC6Q9UBN7 1215 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
PDLIM2-212ENST00000443561 PTPRSQ13332 1948 aa14.58□□□□□ -0.07
PDLIM2-212ENST00000443561 CCDC194A0A1B0GVG4 234 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 KIAA0355O15063 1070 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 KPNA6O60684 536 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 CLTBP09497 229 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 XBP1P17861 261 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 ATP4AP20648 1035 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 ZNF76P36508 570 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 TOB1P50616 345 aaPredicted RBP14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 ADAM17P78536 824 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 SETQ01105 290 aaPredicted RBP14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 SPIRE1Q08AE8 756 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 NBR1Q14596 966 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 LETM2Q2VYF4 491 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 ABHD15Q6UXT9 468 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 ZNF577Q9BSK1 485 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 RNPEPQ9H4A4 650 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 VAV3Q9UKW4 847 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 EMSYQ7Z589 1322 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 LOXHD1Q8IVV2 1947 aa14.58□□□□□ -0.08
PDLIM2-212ENST00000443561 CYP2C9P11712 490 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 UGCGQ16739 394 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 TRIM71Q2Q1W2 868 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 PRPF38BQ5VTL8 546 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 NFRKBQ6P4R8 1299 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 SEPT1Q8WYJ6 367 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 VTI1AQ96AJ9 217 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 ZBTB10Q96DT7 871 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 GDF15Q99988 308 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 WNT8AQ9H1J5 351 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 UNC45AQ9H3U1 944 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 EVPLQ92817 2033 aa14.57□□□□□ -0.08
PDLIM2-212ENST00000443561 H3BRB1 525 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 EML1O00423 815 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 SMIM10L2AP0DMW4 78 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 SMIM10L2BP0DMW5 78 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 EPHB4P54760 987 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 TRAF7Q6Q0C0 670 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 NOC4LQ9BVI4 516 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 FOXP1Q9H334 677 aaPredicted RBP14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 IGSF9BQ9UPX0 1349 aa14.56□□□□□ -0.08
PDLIM2-212ENST00000443561 NOP56O00567 594 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 ZNF862O60290 1169 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 CCNT1O60563 726 aaKnown RBP14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 MARK3P27448 753 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 TRIM29Q14134 588 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 GPNMBQ14956 572 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 BRDTQ58F21 947 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 NOSTRINQ8IVI9 506 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 C4orf32Q8N8J7 132 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
PDLIM2-212ENST00000443561 DCDC2CA8MYV0 355 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 ZBTB42B2RXF5 422 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 STBD1O95210 358 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 CHMP4BP1P59074 171 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 MDM2Q00987 491 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 PTPN11Q06124 597 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 PLCB4Q15147 1175 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 MARCH8Q5T0T0 291 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 LRCH2Q5VUJ6 765 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 ZNF746Q6NUN9 644 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 AFAP1L1Q8TED9 768 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 BADQ92934 168 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 INTS4Q96HW7 963 aaKnown RBP14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 MTMR9Q96QG7 549 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 RIT2Q99578 217 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 OSBPL7Q9BZF2 842 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
PDLIM2-212ENST00000443561 BRMS1Q9HCU9 246 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms