RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ANTXR2P58335 489 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 ARHGAP4P98171 946 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 TMCO2Q7Z6W1 182 aaPredicted RBP15.86■□□□□ 0.13
PTPRE-203ENST00000442830 IFIH1Q9BYX4 1025 aaKnown RBP15.86■□□□□ 0.13
PTPRE-203ENST00000442830 UBE2ZQ9H832 354 aaPredicted RBP15.86■□□□□ 0.13
PTPRE-203ENST00000442830 PSTPIP2Q9H939 334 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 SENP2Q9HC62 589 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 ERAP1Q9NZ08 941 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 MTUS1Q9ULD2 1270 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 FAM50BQ9Y247 325 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 MEIS2O14770 477 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 NCK2O43639 380 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 ADAM17P78536 824 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 HIC1Q14526 733 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 TCTN1Q2MV58 587 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 LEXMQ3ZCV2 418 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.85■□□□□ 0.13
PTPRE-203ENST00000442830 LMBR1Q8WVP7 490 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 PIBF1Q8WXW3 757 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 SETD4Q9NVD3 440 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
PTPRE-203ENST00000442830 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 H3BNC9 293 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 SH2B2O14492 632 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 CTSHP09668 335 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 TCF7P36402 384 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 EPC2Q52LR7 807 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 RNF20Q5VTR2 975 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 USP17L6PQ6QN14 398 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 SYNE3Q6ZMZ3 975 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 NECAB3Q96P71 396 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 GLT8D2Q9H1C3 349 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 SMARCAD1Q9H4L7 1026 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
PTPRE-203ENST00000442830 SLC12A7Q9Y666 1083 aa15.84■□□□□ 0.13
PTPRE-203ENST00000442830 RRN3P2A6NIE6 340 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 hCG_1984214I3L0E3 225 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 RB1P06400 928 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 PPFIA1Q13136 1202 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 MTMR1Q13613 665 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 SPRED2Q7Z698 418 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 TRIM50Q86XT4 487 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 ZNF713Q8N859 430 aaPredicted RBP15.83■□□□□ 0.12
PTPRE-203ENST00000442830 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
PTPRE-203ENST00000442830 C17orf80Q9BSJ5 609 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 LMAN2LQ9H0V9 348 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 RBM28Q9NW13 759 aaKnown RBP15.83■□□□□ 0.12
PTPRE-203ENST00000442830 TUBE1Q9UJT0 475 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 SQORQ9Y6N5 450 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 TTC3P53804 2025 aa15.83■□□□□ 0.12
PTPRE-203ENST00000442830 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
PTPRE-203ENST00000442830 KCNA2P16389 499 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 TMEM31Q5JXX7 168 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 PPP1R18Q6NYC8 613 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 SGMS1Q86VZ5 419 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 TMEM192Q8IY95 271 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 FIBCD1Q8N539 461 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 SRBD1Q8N5C6 995 aaKnown RBP15.82■□□□□ 0.12
PTPRE-203ENST00000442830 GLG1Q92896 1179 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 IL17RAQ96F46 866 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 C11orf84Q9BUA3 381 aaPredicted RBP15.82■□□□□ 0.12
PTPRE-203ENST00000442830 MYL10Q9BUA6 226 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 AZI2Q9H6S1 392 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 UBIAD1Q9Y5Z9 338 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 TAF6LQ9Y6J9 622 aa15.82■□□□□ 0.12
PTPRE-203ENST00000442830 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.81■□□□□ 0.12
PTPRE-203ENST00000442830 MBLAC1A4D2B0 266 aaPredicted RBP15.81■□□□□ 0.12
PTPRE-203ENST00000442830 C5orf67F2Z3F1 127 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 M0QZ92 97 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 PLEKHA8P1O95397 391 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 PLA2G5P39877 138 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 SP4Q02446 784 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 GPM6BQ13491 265 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 GRIK4Q16099 956 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 IER5Q5VY09 327 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 FAM122AQ96E09 287 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 FTHL17Q9BXU8 183 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 NSUN3Q9H649 340 aaKnown RBP15.81■□□□□ 0.12
PTPRE-203ENST00000442830 BCAS3Q9H6U6 928 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 JPH1Q9HDC5 661 aaPredicted RBP15.81■□□□□ 0.12
PTPRE-203ENST00000442830 JADE2Q9NQC1 790 aa15.81■□□□□ 0.12
PTPRE-203ENST00000442830 NFASCO94856 1347 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 SLC27A2O14975 620 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 GPR37L1O60883 481 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 UPP2O95045 317 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 ITGB5P18084 799 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 KCNA5P22460 613 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 SLC26A2P50443 739 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 TSHZ1Q6ZSZ6 1077 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 TMTC3Q6ZXV5 915 aa15.8■□□□□ 0.12
PTPRE-203ENST00000442830 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
PTPRE-203ENST00000442830 SDF4Q9BRK5 362 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms