RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CETN3O15182 167 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 HSF2BPO75031 334 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 CYP11B2P19099 503 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 SHMT1P34896 483 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 KIAA0753Q2KHM9 967 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 SH3GL2Q99962 352 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 ADAMTS1Q9UHI8 967 aa18.15■□□□□ 0.5
SEMA3B-207ENST00000441915 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L15C9J2P7 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L13C9JLJ4 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L11C9JVI0 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L18D6R9N7 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L22D6RA61 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L17D6RBQ6 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L19D6RCP7 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L20D6RJB6 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 SLC26A4O43511 780 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP11P51784 963 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L24Q0WX57 530 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP17L6PQ6QN14 398 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 FAM133AQ8N9E0 248 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 UIMC1Q96RL1 719 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 USP40Q9NVE5 1235 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 C10orf71Q711Q0 1435 aa18.14■□□□□ 0.5
SEMA3B-207ENST00000441915 A0A087X0T9 212 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 HLA-DOAP06340 250 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 FAM228BP0C875 321 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 NNTQ13423 1086 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 EDRF1Q3B7T1 1238 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 GBP6Q6ZN66 633 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 PLEKHA4Q9H4M7 779 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 KCNMB3Q9NPA1 279 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 PITPNM2Q9BZ72 1349 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 LY75O60449 1722 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 FTCDO95954 541 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 GYS1P13807 737 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 DNA2P51530 1060 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 APBA1Q02410 837 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 KCNH2Q12809 1159 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 ASIC2Q16515 512 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 SLFN12Q8IYM2 578 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 COA1Q9GZY4 146 aa18.14■□□□□ 0.49
SEMA3B-207ENST00000441915 GRID2IPA4D2P6 1211 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 EPB41P11171 864 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 HOXA10P31260 410 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 ENOX2Q16206 610 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 DNAJC21Q5F1R6 531 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 TSEN2Q8NCE0 465 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 CAPS2Q9BXY5 557 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 PCDHA1Q9Y5I3 950 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 FRMD3A2A2Y4 597 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 RAD21O60216 631 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 NR2F2P24468 414 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 MEI1Q5TIA1 1274 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 ZC3H3Q8IXZ2 948 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 ANO3Q9BYT9 981 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 GDF3Q9NR23 364 aa18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 GEMIN8Q9NWZ8 242 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-207ENST00000441915 MED24O75448 989 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 HEXIM1O94992 359 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 GLI1P08151 1106 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 IRAK1P51617 712 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 SLC12A3P55017 1021 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 GANQ9H2C0 597 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 EPB41L5Q9HCM4 733 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
SEMA3B-207ENST00000441915 CYP3A7-CYP3A51PA0A087WV96 503 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 CYP3A7P24462 503 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 GUCY2DQ02846 1103 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 PAK2Q13177 524 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 ARSHQ5FYA8 562 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 HDAC9Q9UKV0 1011 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 POTEFA5A3E0 1075 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 STAT3P40763 770 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 CARSP49589 748 aaKnown RBP18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 C10orf76Q5T2E6 689 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 POTEEQ6S8J3 1075 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 SPAG5Q96R06 1193 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 PACSIN1Q9BY11 444 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 NFU1Q9UMS0 254 aa18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 PACSIN2Q9UNF0 486 aaPredicted RBP18.11■□□□□ 0.49
SEMA3B-207ENST00000441915 MOXD1Q6UVY6 613 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 IFT81Q8WYA0 676 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 ZIM3Q96PE6 472 aa18.1■□□□□ 0.49
SEMA3B-207ENST00000441915 ZC3H12CQ9C0D7 883 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms