RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 FAM95CA0A1B0GW59 222 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 C7orf72A4D263 438 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 WASH4PA8MWX3 477 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TPP1O14773 563 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 MYO1BO43795 1136 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 KDM1AO60341 852 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 SYPP08247 313 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 BMP3P12645 472 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 RHCEP18577 417 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 COL8A1P27658 744 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 MAP4P27816 1152 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 RHDQ02161 417 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZNF174Q15697 407 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TMEM95Q3KNT9 176 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 ANGEL2Q5VTE6 544 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TOGARAM2Q6ZUX3 1019 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 NLRP10Q86W26 655 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 NME8Q8N427 588 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 MFSD4AQ8N468 514 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 USHBP1Q8N6Y0 703 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 PTCHD1Q96NR3 888 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 ORAI2Q96SN7 254 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 ACO2Q99798 780 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 NAA15Q9BXJ9 866 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZMAT4Q9H898 229 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 PLCB1Q9NQ66 1216 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 KLHL11Q9NVR0 708 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 CLDND1Q9NY35 253 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TERF2IPQ9NYB0 399 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TCFL5Q9UL49 500 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TRBV23OR9-2A0A075B6M9 112 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 OFD1O75665 1012 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 FXR1P51114 621 aaKnown RBP eCLIP5.09□□□□□ -1.595e-6■■■□□ 17.2
CDC42BPA-207ENST00000441725 KIF11P52732 1056 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 XRRA1Q6P2D8 792 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 NOSTRINQ8IVI9 506 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 MYRIPQ8NFW9 859 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 PIWIL2Q8TC59 973 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 FOXP3Q9BZS1 431 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 PCIF1Q9H4Z3 704 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 NOP53Q9NZM5 478 aaKnown RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 USP21Q9UK80 565 aa5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 TIMM13Q9Y5L4 95 aaPredicted RBP5.09□□□□□ -1.59
CDC42BPA-207ENST00000441725 FKTNO75072 461 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 GJA9P57773 515 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 NFKBIBQ15653 356 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 CPZQ66K79 652 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ESRP1Q6NXG1 681 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ARHGAP36Q6ZRI8 547 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 C22orf34Q6ZV56 151 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 PTRH1Q86Y79 214 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ZBTB34Q8NCN2 500 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 LINC00116Q8NCU8 138 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 DPF3Q92784 378 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 MYRFLQ96LU7 910 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 CDADC1Q9BWV3 514 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 RNF38Q9H0F5 515 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 DNAJC28Q9NX36 388 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 BTG4Q9NY30 223 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ZNF281Q9Y2X9 895 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 TBX3O15119 743 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 COL6A2P12110 1019 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 OSMP13725 252 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 SLC5A1P13866 664 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 C5AR1P21730 350 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 AKAP5P24588 427 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 LLGL1Q15334 1064 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 GPR19Q15760 415 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 IFI16Q16666 785 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 PLA2G4EQ3MJ16 856 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ATAT1Q5SQI0 421 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ANO1Q5XXA6 986 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 LILRA6Q6PI73 481 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 TTLL7Q6ZT98 887 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 SRLQ86TD4 932 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 ARMC10Q8N2F6 343 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 FAM43AQ8N2R8 423 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 DIS3LQ8TF46 1054 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 UTP4Q969X6 686 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 TMEM169Q96HH4 297 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 TNIP3Q96KP6 325 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 SLC2A13Q96QE2 648 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 NLRC4Q9NPP4 1024 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 FNIP2Q9P278 1114 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
CDC42BPA-207ENST00000441725 NKRFO15226 690 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 NPHP1O15259 732 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 PIP5K1CO60331 668 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 GNAT1P11488 350 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 FPR2P25090 351 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 ECE1P42892 770 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 PCBP3P57721 371 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 RPL11P62913 178 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 SRSF2Q01130 221 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 ZPBP2Q6X784 338 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 MIER2Q8N344 545 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
CDC42BPA-207ENST00000441725 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms