RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 DNTTIP2Q5QJE6 756 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 CWF19L1Q69YN2 538 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 TRAF7Q6Q0C0 670 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 FAM160B2Q86V87 743 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 CHD1LQ86WJ1 897 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 GPR161Q8N6U8 529 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 GPT2Q8TD30 523 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 APBB2Q92870 758 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 SECISBP2LQ93073 1101 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 SYAP1Q96A49 352 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 RTKNQ9BST9 563 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 TSPYL1Q9H0U9 437 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 NYAP2Q9P242 653 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 CLIP2Q9UDT6 1046 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 SYNPO2Q9UMS6 1093 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 PLAGL2Q9UPG8 496 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 CFAP47Q6ZTR5 3102 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 SETXQ7Z333 2677 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 CYP2D7A0A087X1C5 515 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 PTPDC1A2A3K4 754 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 B4DLN1 442 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 TMEM232C9JQI7 657 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 MBD4O95243 580 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 TRIM27P14373 513 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 MRPL12P52815 198 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 LMNB2Q03252 620 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 TRIM71Q2Q1W2 868 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 NAALADL2Q58DX5 795 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 MUM1L1Q5H9M0 696 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CHST3Q7LGC8 479 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 RPAP2Q8IXW5 612 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 FTSJ3Q8IY81 847 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 AFG1LQ8WV93 481 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 POF1BQ8WVV4 589 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 RIN2Q8WYP3 895 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CLP1Q92989 425 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 P2RX5Q93086 422 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF830Q96NB3 372 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 PURBQ96QR8 312 aaKnown RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 APOL5Q9BWW9 433 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 SMOC2Q9H3U7 446 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 ARMT1Q9H993 441 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 ZBTB40Q9NUA8 1239 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 CCPG1Q9ULG6 757 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 TNNQ9UQP3 1299 aa7.44□□□□□ -1.22
HDAC6-210ENST00000441703 MORC2Q9Y6X9 1032 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-210ENST00000441703 FAM208BQ5VWN6 2430 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 SOBPA7XYQ1 873 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 C2CD4DB7Z1M9 353 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 PER2O15055 1255 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 PI15O43692 258 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 PRKAB2O43741 272 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 GH1P01241 217 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 CTSHP09668 335 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 SLFN14P0C7P3 912 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 KCNA4P22459 653 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 TECP42680 631 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 ATP8B2P98198 1209 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 CAMK1Q14012 370 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 BAATQ14032 418 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 MFSD10Q14728 455 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 DGKDQ16760 1214 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 SLFN13Q68D06 897 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF771Q7L3S4 317 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 AACSQ86V21 672 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 TDRD5Q8NAT2 981 aaKnown RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 GMCL1P1Q8NEA9 526 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 SPPL3Q8TCT6 385 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 KAT2BQ92831 832 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 WNT8BQ93098 351 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 TMEM63CQ9P1W3 806 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 ARPP21Q9UBL0 812 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-210ENST00000441703 USP18Q9UMW8 372 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 CEP250Q9BV73 2442 aa7.43□□□□□ -1.22
HDAC6-210ENST00000441703 DMXL1Q9Y485 3027 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ANKRD11Q6UB99 2663 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-210ENST00000441703 VPS13AQ96RL7 3174 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 IGKV6D-41A0A0C4DH26 115 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 RBAK-RBAKDNI3L0D1 243 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 TULP2O00295 520 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 GOLIM4O00461 696 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 CDC45O75419 566 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ITGB1P05556 798 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ASGR2P07307 311 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 RASA1P20936 1047 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 DNAJB1P25685 340 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 CALML3P27482 149 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ADD2P35612 726 aa7.42□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF200P98182 395 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-210ENST00000441703 KIAA0753Q2KHM9 967 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms