RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CCT6BQ92526 530 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 PCDHGC5Q9Y5F6 944 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 BIRC3Q13489 604 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 PPP1R7Q15435 360 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 KIF5BP33176 963 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 AMPD3Q01432 767 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 CRYMQ14894 314 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 TLDC1Q6P9B6 456 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 TMEM59LQ9UK28 342 aa22.23■■□□□ 1.15
SHOX2-203ENST00000441443 SERPING1P05155 500 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 OR52Z1P0C646 297 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 RAPGEF1Q13905 1077 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 RPS6KA1Q15418 735 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 KRT71Q3SY84 523 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 C5orf60A6NFR6 353 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 MYMKA6NI61 221 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 SART1O43290 800 aaKnown RBP22.22■■□□□ 1.15
SHOX2-203ENST00000441443 DAPK3O43293 454 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 NOL4O94818 638 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 FGRP09769 529 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 PPP1R2P41236 205 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 ELF3P78545 371 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-203ENST00000441443 RCSD1Q6JBY9 416 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 TPTE2Q6XPS3 522 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 C3orf20Q8ND61 904 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 NSUN4Q96CB9 384 aaKnown RBP22.22■■□□□ 1.15
SHOX2-203ENST00000441443 MMTAG2Q9BU76 263 aaKnown RBP22.22■■□□□ 1.15
SHOX2-203ENST00000441443 MAGEF1Q9HAY2 307 aa22.22■■□□□ 1.15
SHOX2-203ENST00000441443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.22■■□□□ 1.15
SHOX2-203ENST00000441443 A0A1B0GUA9 196 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 MGRN1O60291 552 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 SLC8A1P32418 973 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 LACTB2Q53H82 288 aaPredicted RBP22.21■■□□□ 1.15
SHOX2-203ENST00000441443 DZIP1Q86YF9 867 aaKnown RBP22.21■■□□□ 1.15
SHOX2-203ENST00000441443 LSM14BQ9BX40 385 aaKnown RBP22.21■■□□□ 1.15
SHOX2-203ENST00000441443 ATP6V0A4Q9HBG4 840 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 NOD2Q9HC29 1040 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 MCM9Q9NXL9 1143 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 RTCBQ9Y3I0 505 aaKnown RBP22.21■■□□□ 1.15
SHOX2-203ENST00000441443 F8W031 263 aaPredicted RBP22.21■■□□□ 1.15
SHOX2-203ENST00000441443 ATP6V1G2O95670 118 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 CUL1Q13616 776 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 LRRC55Q6ZSA7 311 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 MAGEC3Q8TD91 643 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
SHOX2-203ENST00000441443 DRD4P21917 467 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 SLC18A3Q16572 532 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 FAM133AQ8N9E0 248 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 ANKS1AQ92625 1134 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 LUC7LQ9NQ29 371 aaKnown RBP22.2■■□□□ 1.15
SHOX2-203ENST00000441443 AMACRQ9UHK6 382 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.15
SHOX2-203ENST00000441443 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 SLC35G1Q2M3R5 365 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 SV2BQ7L1I2 683 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 TCP11Q8WWU5 503 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 ARHGEF1Q92888 912 aaKnown RBP22.2■■□□□ 1.14
SHOX2-203ENST00000441443 NARFQ9UHQ1 456 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 LRP5O75197 1615 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 ORC4O43929 436 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 PRPHP41219 470 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 SATB1Q01826 763 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 LRCH2Q5VUJ6 765 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 TMED8Q6PL24 325 aaPredicted RBP22.2■■□□□ 1.14
SHOX2-203ENST00000441443 STAMBPL1Q96FJ0 436 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 CPVLQ9H3G5 476 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 CEP72Q9P209 647 aa22.2■■□□□ 1.14
SHOX2-203ENST00000441443 USP17L8P0C7I0 530 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 ITGA4P13612 1032 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 TRIM6Q9C030 488 aaPredicted RBP22.19■■□□□ 1.14
SHOX2-203ENST00000441443 SH3GLB2Q9NR46 395 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 TOM1O60784 492 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 IFFO1Q0D2I5 559 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 KLHL30Q0D2K2 578 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 NAIF1Q69YI7 327 aaPredicted RBP22.19■■□□□ 1.14
SHOX2-203ENST00000441443 SCFD2Q8WU76 684 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 THOC1Q96FV9 657 aaKnown RBP22.19■■□□□ 1.14
SHOX2-203ENST00000441443 AK8Q96MA6 479 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 CRNKL1Q9BZJ0 848 aaKnown RBP22.19■■□□□ 1.14
SHOX2-203ENST00000441443 DPH5Q9H2P9 285 aa22.19■■□□□ 1.14
SHOX2-203ENST00000441443 LAD1O00515 517 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 CTNND1O60716 968 aaKnown RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 TRIM37O94972 964 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 FGFR1OPO95684 399 aaKnown RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 CLTAP09496 248 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 TXKP42681 527 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 DHX9Q08211 1270 aaKnown RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 DIXDC1Q155Q3 683 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 AGBL2Q5U5Z8 902 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 FBXO33Q7Z6M2 555 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 PNMA8AQ86V59 439 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 PNMA1Q8ND90 353 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 CALML4Q96GE6 196 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 TRIM31Q9BZY9 425 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 DCP1AQ9NPI6 582 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 PPIP5K2O43314 1243 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 CYTH3O43739 400 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 DNAJC8O75937 253 aaPredicted RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 KIF4AO95239 1232 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms