RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 GIMAP8Q8ND71 665 aaPredicted RBP7.19□□□□□ -1.26
USP46-201ENST00000441222 ZSWIM6Q9HCJ5 1215 aa7.19□□□□□ -1.26
USP46-201ENST00000441222 EPB41L5Q9HCM4 733 aa7.19□□□□□ -1.26
USP46-201ENST00000441222 MRGBPQ9NV56 204 aa7.19□□□□□ -1.26
USP46-201ENST00000441222 L3MBTL1Q9Y468 752 aa7.19□□□□□ -1.26
USP46-201ENST00000441222 KPNA7A9QM74 516 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 CCDC188H7C350 402 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TAF5LO75529 589 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 LRRC63Q05C16 580 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SF3A3Q12874 501 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP46-201ENST00000441222 KIF19Q2TAC6 998 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SESTD1Q86VW0 696 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 RHOT2Q8IXI1 618 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GFM2Q969S9 779 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 TRIM62Q9BVG3 475 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GCOM2Q9BZD3 368 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 FANCLQ9NW38 375 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ATP8A1Q9Y2Q0 1164 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MAP3K19Q56UN5 1328 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SYNGAP1Q96PV0 1343 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 INO80B-WBP1J3KQ70 363 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SPAG7O75391 227 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 FBXW4P57775 412 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ME3Q16798 604 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ZNF658Q5TYW1 1059 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 EXOC4Q96A65 974 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MYL10Q9BUA6 226 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 CALN1Q9BXU9 219 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 INO80BQ9C086 356 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 PARVGQ9HBI0 331 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 PDE11AQ9HCR9 933 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 CYP26B1Q9NR63 512 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 LEMD3Q9Y2U8 911 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 A0A1W2PP64 1363 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MEIS1O00470 390 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 CHL1O00533 1208 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ZBED1O96006 694 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GFAPP14136 432 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MDM2Q00987 491 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 EAPPQ56P03 285 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 RNF219Q5W0B1 726 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 GJA10Q969M2 543 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ZNF594Q96JF6 807 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 EPAS1Q99814 870 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MMTAG2Q9BU76 263 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 COL17A1Q9UMD9 1497 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 MAST1Q9Y2H9 1570 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GOLGA8JA6NMD2 632 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TRPA1O75762 1119 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 IFNAR2P48551 515 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 BASP1P80723 227 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 MORF4L2Q15014 288 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TMED2Q15363 201 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SLFN13Q68D06 897 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 NEK9Q8TD19 979 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 YY1AP1Q9H869 796 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GCNT4Q9P109 453 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ITM2BQ9Y287 266 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 MAP3K15Q6ZN16 1313 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 E2F6O75461 281 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 GNAT1P11488 350 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 NEK2P51955 445 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 YWHAHQ04917 246 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 FAM47AQ5JRC9 791 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 KHDRBS2Q5VWX1 349 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 TRMT10CQ7L0Y3 403 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 LCA5Q86VQ0 697 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 KIRREL3Q8IZU9 778 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 DESI2Q9BSY9 194 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 CAPN11Q9UMQ6 739 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SYNJ2BP-COX16A0A087WUM0 186 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 KRT87PA6NCN2 255 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 AARSP49588 968 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP46-201ENST00000441222 STAT2P52630 851 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 P2RX5Q93086 422 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ZMYND12Q9H0C1 365 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 RPF1Q9H9Y2 349 aaKnown RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 COX16Q9P0S2 106 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 ADCY9O60503 1353 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TNKSO95271 1327 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 BAG6P46379 1132 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SERPINB10P48595 397 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 UBE3CQ15386 1083 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 FRMPD2Q68DX3 1309 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 EMBQ6PCB8 327 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TTC23LQ6PF05 361 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TMED8Q6PL24 325 aaPredicted RBP7.18□□□□□ -1.26
USP46-201ENST00000441222 THEM5Q8N1Q8 247 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 TTC39CQ8N584 583 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 FBXO18Q8NFZ0 1043 aa7.18□□□□□ -1.26
USP46-201ENST00000441222 SNX2O60749 519 aa7.17□□□□□ -1.26
USP46-201ENST00000441222 KRT1P04264 644 aa7.17□□□□□ -1.26
USP46-201ENST00000441222 GUCY2CP25092 1073 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms