RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TMEM145Q8NBT3 493 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ZNF526Q8TF50 670 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 DPF3Q92784 378 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 TOE1Q96GM8 510 aaKnown RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 AARSD1Q9BTE6 412 aaKnown RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 C11orf84Q9BUA3 381 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 BDH2Q9BUT1 245 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 LNPKQ9C0E8 428 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 BCAS3Q9H6U6 928 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 C9orf118A6NHY6 69 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 SGSM2O43147 1006 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 PPP1R11O60927 126 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 STK10O94804 968 aaKnown RBP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADRB1P08588 477 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 HSPA5P11021 654 aaKnown RBP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 NAT1P18440 290 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 HNRNPMP52272 730 aaKnown RBP eCLIP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 PPP2R2AP63151 447 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 SPIRE1Q08AE8 756 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 KIZQ2M2Z5 673 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 RCBTB1Q8NDN9 531 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADAMTS17Q8TE56 1095 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 HNRNPLLQ8WVV9 542 aaKnown RBP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 IPO9Q96P70 1041 aaKnown RBP4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 GORASP1Q9BQQ3 440 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 DTLQ9NZJ0 730 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 SIT1Q9Y3P8 196 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 KIF14Q15058 1648 aa4.63□□□□□ -1.67
HMGB3P11-201ENST00000440127 RPRD2Q5VT52 1461 aaKnown RBP4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 KDM5BQ9UGL1 1544 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 NOBOXO60393 691 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 FGFR1P11362 822 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 ATP2B1P20020 1258 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 SMAD4Q13485 552 aaKnown RBP4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 SLC35F1Q5T1Q4 408 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 NBPF6Q5VWK0 638 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 PRAMEF18Q5VWM3 479 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 MRM1Q6IN84 353 aaKnown RBP4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 NLRP10Q86W26 655 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 ZNF761Q86XN6 746 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 CCDC103Q8IW40 242 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 KREMEN2Q8NCW0 462 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 DCAF4Q8WV16 495 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 LCORQ96JN0 433 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 NBPF4Q96M43 638 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 ALG1Q9BT22 464 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 IER2Q9BTL4 223 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADAM7Q9H2U9 754 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 L2HGDHQ9H9P8 463 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 MYOTQ9UBF9 498 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 NPFFR2Q9Y5X5 522 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 C9orf84Q5VXU9 1444 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 ANKRD50Q9ULJ7 1429 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 KIAA1107Q9UPP5 1409 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 PZPP20742 1482 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 SHANK2Q9UPX8 1470 aa4.62□□□□□ -1.67
HMGB3P11-201ENST00000440127 TRAV20A0A0B4J274 112 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 A0A1B0GTL3 188 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 A0A1W2PQU0 124 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 TBX1O43435 398 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 CNR2P34972 360 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 GTF2F1P35269 517 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 ITGA1P56199 1179 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 DLX2Q07687 328 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 RBL2Q08999 1139 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 IFRD2Q12894 506 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 RTP5Q14D33 572 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 NBPF8Q3BBV2 869 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 RGL3Q3MIN7 710 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 USP53Q70EK8 1073 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 TTLL11Q8NHH1 800 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 NOX5Q96PH1 765 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 NUP155O75694 1391 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 SHROOM2Q13796 1616 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADGBQ8N7X0 1667 aa4.61□□□□□ -1.67
HMGB3P11-201ENST00000440127 MROH6A6NGR9 719 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 CYP1A1P04798 512 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 EFEMP1Q12805 493 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 RAB33AQ14088 237 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 PRSS53Q2L4Q9 553 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 SKOR2Q2VWA4 1001 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 CCDC144BQ3MJ40 725 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 VASNQ6EMK4 673 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADGRG2Q8IZP9 1017 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 TTC9BQ8N6N2 239 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 C1orf159Q96HA4 380 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 PHF20Q9BVI0 1012 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 LGR4Q9BXB1 951 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 ST7Q9NRC1 585 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 SPATA6Q9NWH7 488 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 FTSJ1Q9UET6 329 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 TMEFF2Q9UIK5 374 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 JAG2Q9Y219 1238 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms