RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 NEK8Q86SG6 692 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ARRDC4Q8NCT1 418 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KLHDC9Q8NEP7 349 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 AP5M1Q9H0R1 490 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 C11orf49Q9H6J7 331 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 BCAS3Q9H6U6 928 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 EHMT1Q9H9B1 1298 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DOCK5Q9H7D0 1870 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 VWA3AA6NCI4 1184 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KBTBD13C9JR72 458 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 LAD1O00515 517 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 WNT7AO00755 349 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 COL6A1P12109 1028 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 UBA1P22314 1058 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ARHGAP4P98171 946 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GRIN1Q05586 938 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ARHGAP1Q07960 439 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CCSAPQ6IQ19 270 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KRBA2Q6ZNG9 492 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 RNF180Q86T96 592 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DNAJC25Q9H1X3 360 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PKD2L1Q9P0L9 805 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KIAA1468Q9P260 1216 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CEP290O15078 2479 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SPATA31C2B4DYI2 1134 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 EDIL3O43854 480 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 KCNA10Q16322 511 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TEX2Q8IWB9 1127 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CRYGNQ8WXF5 182 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PHF24Q9UPV7 400 aa16.36■□□□□ 0.21
TNFRSF1A-204ENST00000440083 POLR2DO15514 142 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GGPS1O95749 300 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GH1P01241 217 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 LONP1P36776 959 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ZNF165P49910 485 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ACLYP53396 1101 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 LETM2Q2VYF4 491 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GNPTABQ3T906 1256 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GNASQ5JWF2 1037 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DTHD1Q6ZMT9 781 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ELOA2Q8IYF1 753 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SYMPKQ92797 1274 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CBX8Q9HC52 389 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 USP25Q9UHP3 1055 aa16.35■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TNRC18O15417 2968 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 A0A1W2PQ45 241 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 A0A1W2PQY0 241 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 FAM86B1E9PN63 330 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GOLGA6L19H0YKK7 550 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NKRFO15226 690 aaKnown RBP eCLIP16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NEMFO60524 1076 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CCNT1O60563 726 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ATP9AO75110 1047 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 STAM2O75886 525 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 FAM86B2P0C5J1 330 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 OR52Z1P0C646 297 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ARP10275 920 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ICAM3P32942 547 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NKX3-2P78367 333 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NLRX1Q86UT6 975 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DHX58Q96C10 678 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 NAP1L4Q99733 375 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PCDH10Q9P2E7 1040 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SERTAD1Q9UHV2 236 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 Q9Y3F1 56 aa16.34■□□□□ 0.21
TNFRSF1A-204ENST00000440083 MKI67P46013 3256 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ASGR1P07306 291 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MYL3P08590 195 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CYP3A4P08684 503 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 KCNA2P16389 499 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ZNF76P36508 570 aa16.33■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PRPHP41219 470 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms