RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 STARD7Q9NQZ5 370 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 FBXO40Q9UH90 709 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PYCARDQ9ULZ3 195 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 COLQQ9Y215 455 aaPredicted RBP5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PLIN4Q96Q06 1357 aa5.34□□□□□ -1.55
EDEM3-203ENST00000439962 PALM3A6NDB9 673 aaPredicted RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 KIF28PB7ZC32 967 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 SMC2O95347 1197 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 AKR1A1P14550 325 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 SMARCA1P28370 1054 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 SARSP49591 514 aaKnown RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CCL23P55773 120 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CCZ1BP86790 482 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CCZ1P86791 482 aaPredicted RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 GRM4Q14833 912 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 NCAPHQ15003 741 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 PPP4R3BQ5MIZ7 849 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 UTP14CQ5TAP6 766 aaKnown RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 TRIM50Q86XT4 487 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CREBRFQ8IUR6 639 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 SYTL5Q8TDW5 730 aaPredicted RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CCDC94Q9BW85 323 aaPredicted RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 C11orf49Q9H6J7 331 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 PSTPIP2Q9H939 334 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 CGNQ9P2M7 1197 aaKnown RBP5.34□□□□□ -1.56
EDEM3-203ENST00000439962 PRKAG2Q9UGJ0 569 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 KCNJ14Q9UNX9 436 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 GINS2Q9Y248 185 aa5.34□□□□□ -1.56
EDEM3-203ENST00000439962 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 GCOM1H8Y6P7 765 aaPredicted RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 OPLAHO14841 1288 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 POLR2MP0CAP2 368 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF865P0CJ78 1059 aaPredicted RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ACRP10323 421 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 GNAQP50148 359 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TUBB2AQ13885 445 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ARL6IP4Q66PJ3 421 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 WWC2Q6AWC2 1192 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 RNF180Q86T96 592 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 DHX37Q8IY37 1157 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 FAM133AQ8N9E0 248 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CACTINQ8WUQ7 758 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 AFG1LQ8WV93 481 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TUBB2BQ9BVA1 445 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 PHF20Q9BVI0 1012 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 AP5M1Q9H0R1 490 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ABHD16BQ9H3Z7 469 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SPC25Q9HBM1 224 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 FBXO2Q9UK22 296 aaPredicted RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 KCNH3Q9ULD8 1083 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 MRPL11Q9Y3B7 192 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SYNRGQ9UMZ2 1314 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 LOC285556D6RIA3 1793 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 PNMA6FA0A0J9YX94 578 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 A0A1B0GVL5 298 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SMCO2A6NFE2 343 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SPDYE3A6NKU9 549 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TULP1O00294 542 aaPredicted RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 LAD1O00515 517 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CHMP2AO43633 222 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 NR3C2P08235 984 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TPM1P09493 284 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CYP2C9P11712 490 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF76P36508 570 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 PPP1R2P41236 205 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 IGBP1P78318 339 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 PLCB2Q00722 1185 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TLE2Q04725 743 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 PTPN14Q15678 1187 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CYFIP1Q7L576 1253 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CCAR2Q8N163 923 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 SHCBP1Q8NEM2 672 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 OR6J1Q8NGC5 347 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CUL5Q93034 780 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF668Q96K58 619 aaPredicted RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 NAA15Q9BXJ9 866 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TRPV6Q9H1D0 765 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TMX1Q9H3N1 280 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 MAGEF1Q9HAY2 307 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 TRMT13Q9NUP7 481 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 ADD3Q9UEY8 706 aaKnown RBP5.33□□□□□ -1.56
EDEM3-203ENST00000439962 NOD1Q9Y239 953 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 RLFQ13129 1914 aa5.33□□□□□ -1.56
EDEM3-203ENST00000439962 VPS13AQ96RL7 3174 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 PLXNB2O15031 1838 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 hCG_1984214I3L0E3 225 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 ZSCAN12O43309 604 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 SKILP12757 684 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 TNNT1P13805 278 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 SFPQP23246 707 aaKnown RBP eCLIP5.32□□□□□ -1.56
EDEM3-203ENST00000439962 KRT2P35908 639 aa5.32□□□□□ -1.56
EDEM3-203ENST00000439962 MORC3Q14149 939 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms