RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SPATA31C2B4DYI2 1134 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLC26A4O43511 780 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLURP2P0DP57 97 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 GCFC2P16383 781 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 MCM7P33993 719 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 TXLNAP40222 546 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 ECE1P42892 770 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 IREB2P48200 963 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP11P51784 963 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 NDUFA8P51970 172 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 HIRAP54198 1017 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 EPHA4P54764 986 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 BACE1P56817 501 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 CAMK4Q16566 473 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 INF2Q27J81 1249 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SHROOM1Q2M3G4 852 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 NOL9Q5SY16 702 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 FAM83BQ5T0W9 1011 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SH3PXD2AQ5TCZ1 1133 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 JAKMIP3Q5VZ66 844 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SHC4Q6S5L8 630 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 DTHD1Q6ZMT9 781 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 RASGRP2Q7LDG7 609 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 PNMA8AQ86V59 439 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLC9A9Q8IVB4 645 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SPICE1Q8N0Z3 855 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SAMD3Q8N6K7 520 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZNF280CQ8ND82 737 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCG3Q8WXD2 468 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 COA7Q96BR5 231 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 KLRG1Q96E93 195 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 AK8Q96MA6 479 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 WRNIP1Q96S55 665 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 NUP88Q99567 741 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLF1Q9BQI6 1058 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 RAB34Q9BZG1 259 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 RANBP17Q9H2T7 1088 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 GOLPH3LQ9H4A5 285 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 EHMT1Q9H9B1 1298 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 ANO10Q9NW15 660 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 MAP3K20Q9NYL2 800 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCHIP1Q9P0W5 487 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 BIN2Q9UBW5 565 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 HPSEQ9Y251 543 aa4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 MRPL11Q9Y3B7 192 aaKnown RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 CTDP1Q9Y5B0 961 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P37-201ENST00000439613 ASTN2O75129 1339 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 ABCB11O95342 1321 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CYP3A7-CYP3A51PA0A087WV96 503 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 VWA3AA6NCI4 1184 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 SPDYE3A6NKU9 549 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 NEMFO60524 1076 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCNT1O60563 726 aaKnown RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PPP1R11O60927 126 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZBED4O75132 1171 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP2O75604 605 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 SMC2O95347 1197 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 ICAM1P05362 532 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 MYL1P05976 194 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 OR52Z1P0C646 297 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PTPRAP18433 802 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CYP3A7P24462 503 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 INPP5BP32019 993 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 EPHX2P34913 555 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 UBA7P41226 1012 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PLA2G4AP47712 749 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 OAZ1P54368 228 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TYRO3Q06418 890 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 SPP2Q13103 211 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PDIA5Q14554 519 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 STX1AQ16623 288 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM266Q2M3C6 531 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 LETM2Q2VYF4 491 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 EARS2Q5JPH6 523 aaKnown RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 WDR44Q5JSH3 913 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 GNASQ5JWF2 1037 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PPP4R3AQ6IN85 833 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 MOXD1Q6UVY6 613 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 KRBA2Q6ZNG9 492 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CAPN12Q6ZSI9 719 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TAS1R3Q7RTX0 852 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 KRT26Q7Z3Y9 468 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 GAS2L3Q86XJ1 694 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 MCF2L2Q86YR7 1114 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CKAP2LQ8IYA6 745 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CEP57L1Q8IYX8 460 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 C4orf32Q8N8J7 132 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 IQUBQ8NA54 791 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CNNM3Q8NE01 707 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 RASGRP4Q8TDF6 673 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TBCKQ8TEA7 893 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZKSCAN4Q969J2 545 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 C12orf42Q96LP6 360 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CLIC6Q96NY7 704 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 NIFKQ9BYG3 293 aaKnown RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 GTPBP4Q9BZE4 634 aaKnown RBP4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TANGO6Q9C0B7 1094 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CSRNP2Q9H175 543 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms