RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
APP-208ENST00000439274 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
APP-208ENST00000439274 SH2D3CQ8N5H7 860 aa16.94■□□□□ 0.3
APP-208ENST00000439274 RUBCNQ92622 972 aa16.94■□□□□ 0.3
APP-208ENST00000439274 ZIM3Q96PE6 472 aa16.94■□□□□ 0.3
APP-208ENST00000439274 EPB41L5Q9HCM4 733 aa16.94■□□□□ 0.3
APP-208ENST00000439274 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
APP-208ENST00000439274 GOLGA8KD6RF30 607 aa16.93■□□□□ 0.3
APP-208ENST00000439274 HEXIM1O94992 359 aaKnown RBP16.93■□□□□ 0.3
APP-208ENST00000439274 GNGT1P63211 74 aa16.93■□□□□ 0.3
APP-208ENST00000439274 PPFIA1Q13136 1202 aa16.93■□□□□ 0.3
APP-208ENST00000439274 TRADDQ15628 312 aa16.93■□□□□ 0.3
APP-208ENST00000439274 NAB2Q15742 525 aa16.93■□□□□ 0.3
APP-208ENST00000439274 KCTD16Q68DU8 428 aa16.93■□□□□ 0.3
APP-208ENST00000439274 CAVIN3Q969G5 261 aa16.93■□□□□ 0.3
APP-208ENST00000439274 PSTPIP2Q9H939 334 aa16.93■□□□□ 0.3
APP-208ENST00000439274 BMP2KQ9NSY1 1161 aaPredicted RBP16.93■□□□□ 0.3
APP-208ENST00000439274 GRIN2DO15399 1336 aa16.93■□□□□ 0.3
APP-208ENST00000439274 HSF2BPO75031 334 aa16.93■□□□□ 0.3
APP-208ENST00000439274 TTLL1O95922 423 aa16.93■□□□□ 0.3
APP-208ENST00000439274 KRT14P02533 472 aa16.93■□□□□ 0.3
APP-208ENST00000439274 ACTN1P12814 892 aa16.93■□□□□ 0.3
APP-208ENST00000439274 PTPROQ16827 1216 aa16.93■□□□□ 0.3
APP-208ENST00000439274 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
APP-208ENST00000439274 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
APP-208ENST00000439274 RUFY1Q96T51 708 aa16.93■□□□□ 0.3
APP-208ENST00000439274 KRT12Q99456 494 aa16.93■□□□□ 0.3
APP-208ENST00000439274 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
APP-208ENST00000439274 RAD21O60216 631 aa16.92■□□□□ 0.3
APP-208ENST00000439274 OPA1O60313 960 aa16.92■□□□□ 0.3
APP-208ENST00000439274 MAGEA9P43362 315 aa16.92■□□□□ 0.3
APP-208ENST00000439274 GUCY2FP51841 1108 aa16.92■□□□□ 0.3
APP-208ENST00000439274 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
APP-208ENST00000439274 KCTD19Q17RG1 926 aaPredicted RBP16.92■□□□□ 0.3
APP-208ENST00000439274 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
APP-208ENST00000439274 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
APP-208ENST00000439274 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
APP-208ENST00000439274 GOLPH3Q9H4A6 298 aa16.92■□□□□ 0.3
APP-208ENST00000439274 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
APP-208ENST00000439274 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
APP-208ENST00000439274 TNFRSF8P28908 595 aa16.92■□□□□ 0.3
APP-208ENST00000439274 CASP5P51878 434 aa16.92■□□□□ 0.3
APP-208ENST00000439274 KLHL30Q0D2K2 578 aa16.92■□□□□ 0.3
APP-208ENST00000439274 ADAM9Q13443 819 aa16.92■□□□□ 0.3
APP-208ENST00000439274 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
APP-208ENST00000439274 CCDC65Q8IXS2 484 aa16.92■□□□□ 0.3
APP-208ENST00000439274 CCDC43Q96MW1 224 aaKnown RBP16.92■□□□□ 0.3
APP-208ENST00000439274 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
APP-208ENST00000439274 GDF3Q9NR23 364 aa16.92■□□□□ 0.3
APP-208ENST00000439274 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
APP-208ENST00000439274 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
APP-208ENST00000439274 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
APP-208ENST00000439274 MED24O75448 989 aa16.91■□□□□ 0.3
APP-208ENST00000439274 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
APP-208ENST00000439274 CYP11B2P19099 503 aa16.91■□□□□ 0.3
APP-208ENST00000439274 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
APP-208ENST00000439274 SEPT2Q15019 361 aa16.91■□□□□ 0.3
APP-208ENST00000439274 MEI1Q5TIA1 1274 aa16.91■□□□□ 0.3
APP-208ENST00000439274 ALS2CLQ60I27 953 aa16.91■□□□□ 0.3
APP-208ENST00000439274 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
APP-208ENST00000439274 FOXR2Q6PJQ5 311 aa16.91■□□□□ 0.3
APP-208ENST00000439274 POTEGQ6S5H5 508 aa16.91■□□□□ 0.3
APP-208ENST00000439274 POTEEQ6S8J3 1075 aa16.91■□□□□ 0.3
APP-208ENST00000439274 IFT20Q8IY31 132 aa16.91■□□□□ 0.3
APP-208ENST00000439274 NUCKS1Q9H1E3 243 aaKnown RBP16.91■□□□□ 0.3
APP-208ENST00000439274 GANQ9H2C0 597 aa16.91■□□□□ 0.3
APP-208ENST00000439274 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
APP-208ENST00000439274 ZBTB5O15062 677 aa16.91■□□□□ 0.3
APP-208ENST00000439274 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
APP-208ENST00000439274 EPS15P42566 896 aa16.91■□□□□ 0.3
APP-208ENST00000439274 ASIC2Q16515 512 aa16.91■□□□□ 0.3
APP-208ENST00000439274 ARSHQ5FYA8 562 aa16.91■□□□□ 0.3
APP-208ENST00000439274 PACS2Q86VP3 889 aa16.91■□□□□ 0.3
APP-208ENST00000439274 BCAS4Q8TDM0 211 aa16.91■□□□□ 0.3
APP-208ENST00000439274 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
APP-208ENST00000439274 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
APP-208ENST00000439274 EIF3HO15372 352 aaKnown RBP eCLIP16.9■□□□□ 0.3
APP-208ENST00000439274 SHMT1P34896 483 aa16.9■□□□□ 0.3
APP-208ENST00000439274 ATP1A2P50993 1020 aa16.9■□□□□ 0.3
APP-208ENST00000439274 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
APP-208ENST00000439274 PDCLQ13371 301 aa16.9■□□□□ 0.3
APP-208ENST00000439274 GLE1Q53GS7 698 aaKnown RBP16.9■□□□□ 0.3
APP-208ENST00000439274 HYIQ5T013 277 aa16.9■□□□□ 0.3
APP-208ENST00000439274 INPP4AQ96PE3 977 aaPredicted RBP16.9■□□□□ 0.3
APP-208ENST00000439274 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
APP-208ENST00000439274 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
APP-208ENST00000439274 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
APP-208ENST00000439274 KDM3AQ9Y4C1 1321 aa16.9■□□□□ 0.3
APP-208ENST00000439274 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
APP-208ENST00000439274 EPB41P11171 864 aaKnown RBP16.9■□□□□ 0.3
APP-208ENST00000439274 SLC9A1P19634 815 aa16.9■□□□□ 0.3
APP-208ENST00000439274 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
APP-208ENST00000439274 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
APP-208ENST00000439274 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
APP-208ENST00000439274 ZNF233A6NK53 670 aa16.89■□□□□ 0.29
APP-208ENST00000439274 MEIS1O00470 390 aa16.89■□□□□ 0.29
APP-208ENST00000439274 GNA14O95837 355 aa16.89■□□□□ 0.29
APP-208ENST00000439274 NR2F2P24468 414 aa16.89■□□□□ 0.29
APP-208ENST00000439274 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
APP-208ENST00000439274 PSMC6P62333 389 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms