RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PLCD1P51178 756 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 FANCCQ00597 558 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 KCTD2Q14681 263 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 SSH3Q8TE77 659 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 CRELD1Q96HD1 420 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 MAML3Q96JK9 1138 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 TOX2Q96NM4 488 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 MMP19Q99542 508 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 OSMRQ99650 979 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 CCDC8Q9H0W5 538 aaPredicted RBP10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 DNAJB12Q9NXW2 375 aaKnown RBP10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 SWAP70Q9UH65 585 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 CNPY2Q9Y2B0 182 aa10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 DIS3Q9Y2L1 958 aaKnown RBP10.5□□□□□ -0.73
LSMEM1-202ENST00000439068 KIAA0355O15063 1070 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 BCAR3O75815 825 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 TRIM27P14373 513 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 NRLP54845 237 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 ERC1Q8IUD2 1116 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 TCF12Q99081 682 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 LIN7BQ9HAP6 207 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 FAM8A1Q9UBU6 413 aa10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 DBNLQ9UJU6 430 aaKnown RBP10.49□□□□□ -0.73
LSMEM1-202ENST00000439068 METTL12A8MUP2 240 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 HOXD8P13378 290 aaPredicted RBP10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 AKR1A1P14550 325 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 MX2P20592 715 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 GUCY1A2P33402 732 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 FAM47AQ5JRC9 791 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 SLC9C2Q5TAH2 1124 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 ZNF468Q5VIY5 522 aaPredicted RBP10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 ZKSCAN2Q63HK3 967 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 CCDC129Q6ZRS4 1044 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 ATXN2LQ8WWM7 1075 aaKnown RBP10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 CCDC17Q96LX7 622 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 ZNF576Q9H609 170 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 SPC25Q9HBM1 224 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 STARD7Q9NQZ5 370 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 DZANK1Q9NVP4 752 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 FAM184BQ9ULE4 1060 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 NOP58Q9Y2X3 529 aaKnown RBP10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 MROH7Q68CQ1 1323 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 VCANP13611 3396 aa10.48□□□□□ -0.73
LSMEM1-202ENST00000439068 A0A1W2PQ45 241 aaPredicted RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 A0A1W2PQY0 241 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 A0A1W2PRG0 241 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 WDR46O15213 610 aaKnown RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 PGK1P00558 417 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 TIMP1P01033 207 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ERCC5P28715 1186 aaPredicted RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ZNF76P36508 570 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 STAT3P40763 770 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 GPLD1P80108 840 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ATP11AP98196 1134 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 GABPAQ06546 454 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 SPRED3Q2MJR0 410 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 HSP90AB4PQ58FF6 505 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ANKRD33Q7Z3H0 272 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 NT5DC4Q86YG4 428 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 FTSJ3Q8IY81 847 aaKnown RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 MSL3Q8N5Y2 521 aaKnown RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 EAF2Q96CJ1 260 aaPredicted RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 GLT1D1Q96MS3 346 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 VCPKMTQ9H867 229 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 MSRAQ9UJ68 235 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 TMX2Q9Y320 296 aa10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 CTDP1Q9Y5B0 961 aaPredicted RBP10.47□□□□□ -0.73
LSMEM1-202ENST00000439068 ACLYP53396 1101 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 ICA1Q05084 483 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 AACSQ86V21 672 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 TMEM57Q8N5G2 664 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 PCSK9Q8NBP7 692 aaKnown RBP10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 C3orf58Q8NDZ4 430 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 PPM1EQ8WY54 764 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 RNF34Q969K3 372 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 RIOK1Q9BRS2 568 aaKnown RBP10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 MTIF3Q9H2K0 278 aaKnown RBP10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 RASSF4Q9H2L5 321 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 KANSL2Q9H9L4 492 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
LSMEM1-202ENST00000439068 TTC28Q96AY4 2481 aa10.46□□□□□ -0.74
LSMEM1-202ENST00000439068 ELP1O95163 1332 aa10.45□□□□□ -0.74
LSMEM1-202ENST00000439068 TMEM238LA0A1B0GVL6 79 aa10.45□□□□□ -0.74
LSMEM1-202ENST00000439068 H3BM21 787 aa10.45□□□□□ -0.74
LSMEM1-202ENST00000439068 TLR3O15455 904 aaKnown RBP10.45□□□□□ -0.74
LSMEM1-202ENST00000439068 SIN3BO75182 1162 aa10.45□□□□□ -0.74
LSMEM1-202ENST00000439068 PGK2P07205 417 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms