RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 PCDHB13Q9Y5F0 798 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 ARHGEF28Q8N1W1 1705 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 CFAP73A6NFT4 308 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
BDNF-210ENST00000438929 KRT15P19012 456 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 TNFAIP3P21580 790 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 EIF3BP55884 814 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 DR1Q01658 176 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 TFAP4Q01664 338 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 ADAM9Q13443 819 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 PDIA6Q15084 440 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 TRADDQ15628 312 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 ARHGAP44Q17R89 818 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 WDR59Q6PJI9 974 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 ELOA2Q8IYF1 753 aaPredicted RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 CERKQ8TCT0 537 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 CAVIN3Q969G5 261 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 INTUQ9ULD6 942 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 PLAGL2Q9UPG8 496 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 OVOS2A0A0J9YW53 1432 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 OVOS2Q6IE36 1432 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 GRIN2DO15399 1336 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 PDS5AQ29RF7 1337 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 TBCAO75347 108 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 ZNF76P36508 570 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 MSH2P43246 934 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 ERFP50548 548 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 CCNHP51946 323 aaPredicted RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 RWDD2BP57060 319 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 FKBP3Q00688 224 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 ZNF211Q13398 564 aaPredicted RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 MKRN4PQ13434 485 aaPredicted RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 CALCRLQ16602 461 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 CROCCP2Q86T23 111 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 PAF1Q8N7H5 531 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 PBKQ96KB5 322 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 TRIM51Q9BSJ1 452 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 TMBIM4Q9HC24 238 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 SCOCQ9UIL1 159 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 NOC2LQ9Y3T9 749 aaKnown RBP6.7□□□□□ -1.34
BDNF-210ENST00000438929 EP400Q96L91 3159 aa6.7□□□□□ -1.34
BDNF-210ENST00000438929 UTYO14607 1347 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 NMT2O60551 498 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 UPP2O95045 317 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 SLC8A3P57103 927 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 FAM26FQ5R3K3 315 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 THEMIS2Q5TEJ8 643 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 YTHDF3Q7Z739 585 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 LRRC34Q8IZ02 419 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 SCYL3Q8IZE3 742 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 ENAHQ8N8S7 591 aaPredicted RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 NLRP3Q96P20 1036 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 PLVAPQ9BX97 442 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 TLR10Q9BXR5 811 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 NCAPD2Q15021 1401 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 FAM237AA0A1B0GTK4 181 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 TCP11X1B4DZS4 312 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 EPB41P11171 864 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 PBX1P40424 430 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 STAT1P42224 750 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 CTCFP49711 727 aaPredicted RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 RASSF2P50749 326 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 RASGRF1Q13972 1273 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 QPCTQ16769 361 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 TXNRD1Q16881 649 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 ARL6IP4Q66PJ3 421 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 ZC3H18Q86VM9 953 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 DNAAF5Q86Y56 855 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 SYCP3Q8IZU3 236 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 GBP7Q8N8V2 638 aaPredicted RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 PNMA1Q8ND90 353 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 ZCRB1Q8TBF4 217 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 LARP4BQ92615 738 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 RUBCNQ92622 972 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 FGFR1OP2Q9NVK5 253 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 COL4A3BPQ9Y5P4 624 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 GSG1L2A8MUP6 293 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 CCDC188H7C350 402 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 DNM1LO00429 736 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 TXNDC9O14530 226 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 THAP12O43422 761 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 BAG2O95816 211 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 XRCC5P13010 732 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 COPB2P35606 906 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 DYNLL1P63167 89 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 NBPF10Q6P3W6 841 aaKnown RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 SEPT14Q6ZU15 432 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 UBL4BQ8N7F7 174 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 TTLL11Q8NHH1 800 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.69□□□□□ -1.34
BDNF-210ENST00000438929 PRCCQ92733 491 aaPredicted RBP6.69□□□□□ -1.34
BDNF-210ENST00000438929 TCEAL9Q9UHQ7 104 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 C15orf41Q9Y2V0 281 aa6.69□□□□□ -1.34
BDNF-210ENST00000438929 CDC42BPGQ6DT37 1551 aa6.68□□□□□ -1.34
BDNF-210ENST00000438929 LRRC10BA6NIK2 292 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms