RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 OSBP2Q969R2 916 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 IWS1Q96ST2 819 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 BCL11AQ9H165 835 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 DDX41Q9UJV9 622 aaKnown RBP13.1□□□□□ -0.31
CSTF3-203ENST00000438862 PLAGL2Q9UPG8 496 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
CSTF3-203ENST00000438862 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 GPAA1O43292 621 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 MS4A1P11836 297 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 CAMK1Q14012 370 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
CSTF3-203ENST00000438862 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 ADGRA3Q8IWK6 1321 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
CSTF3-203ENST00000438862 DMDP11532 3685 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 RNF113AO15541 343 aaKnown RBP13.08□□□□□ -0.32
CSTF3-203ENST00000438862 HMMRO75330 724 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
CSTF3-203ENST00000438862 ZNF286BP0CG31 522 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
CSTF3-203ENST00000438862 NOVP48745 357 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 HIC1Q14526 733 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 KBTBD3Q8NAB2 608 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 ATP6V0A1Q93050 837 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 WNT2BQ93097 391 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
CSTF3-203ENST00000438862 C17orf102A2RUQ5 167 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 EIF3JO75822 258 aaKnown RBP13.07□□□□□ -0.32
CSTF3-203ENST00000438862 PPARAQ07869 468 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
CSTF3-203ENST00000438862 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 ZBTB33Q86T24 672 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 NAPBQ9H115 298 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
CSTF3-203ENST00000438862 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 NMT2O60551 498 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
CSTF3-203ENST00000438862 RLBP1P12271 317 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 NRIP1P48552 1158 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 KCNV1Q6PIU1 500 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 UBALD2Q8IYN6 164 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 SUSD6Q92537 303 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 ZNF689Q96CS4 500 aaPredicted RBP13.06□□□□□ -0.32
CSTF3-203ENST00000438862 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
CSTF3-203ENST00000438862 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
CSTF3-203ENST00000438862 MED19A0JLT2 244 aaPredicted RBP13.05□□□□□ -0.32
CSTF3-203ENST00000438862 RBAK-RBAKDNI3L0D1 243 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 RGS20O76081 388 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 CSPG5O95196 566 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 GLP2RO95838 553 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 GNAT1P11488 350 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 HOXC8P31273 242 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 DGLUCYQ7Z3D6 616 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 ADGRD2Q7Z7M1 963 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 C16orf70Q9BSU1 422 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
CSTF3-203ENST00000438862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSTF3-203ENST00000438862 PCDHGA10Q9Y5H3 936 aa13.05□□□□□ -0.32
CSTF3-203ENST00000438862 H3BRB1 525 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 M0R2C6 588 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 TREHO43280 583 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 KRT37O76014 449 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 ITGB1P05556 798 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 CTSHP09668 335 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
CSTF3-203ENST00000438862 DNAJB1P25685 340 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 FAM26DQ5JW98 314 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 RBM23Q86U06 439 aaKnown RBP13.04□□□□□ -0.32
CSTF3-203ENST00000438862 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
CSTF3-203ENST00000438862 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 RNPEPQ9H4A4 650 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 TUT1Q9H6E5 874 aaKnown RBP13.04□□□□□ -0.32
CSTF3-203ENST00000438862 TLE6Q9H808 572 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
CSTF3-203ENST00000438862 VPS13AQ96RL7 3174 aa13.04□□□□□ -0.32
CSTF3-203ENST00000438862 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 GOLGA8CPA6NN73 597 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 ENPP3O14638 875 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
CSTF3-203ENST00000438862 DGKIO75912 1065 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 CLCN5P51795 746 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 CELF3Q5SZQ8 465 aaKnown RBP13.03□□□□□ -0.32
CSTF3-203ENST00000438862 ARHGEF16Q5VV41 709 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 ATP8B4Q8TF62 1192 aa13.03□□□□□ -0.32
CSTF3-203ENST00000438862 POF1BQ8WVV4 589 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms