RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ME3Q16798 604 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 DAGLBQ8NCG7 672 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 WASF1Q92558 559 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 GTF3C6Q969F1 213 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 ERAP1Q9NZ08 941 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 TELO2Q9Y4R8 837 aa28.13■■■□□ 2.09
RAPGEF1-206ENST00000438647 PARNO95453 639 aaKnown RBP28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 HOXC8P31273 242 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 CIITAP33076 1130 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 BLIDQ8IZY5 108 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 GLG1Q92896 1179 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 AIFM3Q96NN9 605 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 SMARCAD1Q9H4L7 1026 aa28.12■■■□□ 2.09
RAPGEF1-206ENST00000438647 IGLV3-22A0A075B6J6 115 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 USP11P51784 963 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 ITGB3BPQ13352 177 aaPredicted RBP28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 HERVK_113Q902F9 699 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 ATP6V0A1Q93050 837 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 RNPEPQ9H4A4 650 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 AZI2Q9H6S1 392 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 ORC3Q9UBD5 711 aaPredicted RBP28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 EMSYQ7Z589 1322 aa28.11■■■□□ 2.09
RAPGEF1-206ENST00000438647 IPO5O00410 1097 aaKnown RBP28.1■■■□□ 2.09
RAPGEF1-206ENST00000438647 SELPP16109 830 aa28.1■■■□□ 2.09
RAPGEF1-206ENST00000438647 RASIP1Q5U651 963 aa28.1■■■□□ 2.09
RAPGEF1-206ENST00000438647 NECAB1Q8N987 351 aa28.1■■■□□ 2.09
RAPGEF1-206ENST00000438647 DHX38Q92620 1227 aaKnown RBP28.1■■■□□ 2.09
RAPGEF1-206ENST00000438647 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 CTDNEP1O95476 244 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 CKBP12277 381 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 ACTR2P61160 394 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 ZNF200P98182 395 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 PRR16Q569H4 304 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 LRRC8DQ7L1W4 858 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 DEFB128Q7Z7B8 93 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 SERINC5Q86VE9 423 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 TNPO1Q92973 898 aaKnown RBP28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 ZNF577Q9BSK1 485 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 UPF2Q9HAU5 1272 aaKnown RBP28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 TBC1D22BQ9NU19 505 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 TCEAL9Q9UHQ7 104 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 NRCAMQ92823 1304 aa28.09■■■□□ 2.09
RAPGEF1-206ENST00000438647 LGR5O75473 907 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 LARGE1O95461 756 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 ACTN1P12814 892 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 HIC1Q14526 733 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 OTOP2Q7RTS6 562 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 TBCKQ8TEA7 893 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 PHF20Q9BVI0 1012 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 SETD4Q9NVD3 440 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 TANC1Q9C0D5 1861 aa28.08■■■□□ 2.09
RAPGEF1-206ENST00000438647 M0R2N6 131 aa28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 RBM25P49756 843 aaKnown RBP28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 NPY5RQ15761 445 aa28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 FAM109BQ6ICB4 259 aaPredicted RBP28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 KRT25Q7Z3Z0 450 aa28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 KCNJ14Q9UNX9 436 aa28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 LIMCH1Q9UPQ0 1083 aa28.07■■■□□ 2.08
RAPGEF1-206ENST00000438647 TREHO43280 583 aa28.06■■■□□ 2.08
RAPGEF1-206ENST00000438647 MARK3P27448 753 aa28.06■■■□□ 2.08
RAPGEF1-206ENST00000438647 DEFB123Q8N688 67 aa28.06■■■□□ 2.08
RAPGEF1-206ENST00000438647 FTOQ9C0B1 505 aaKnown RBP eCLIP28.06■■■□□ 2.08
RAPGEF1-206ENST00000438647 TRIP12Q14669 1992 aaPredicted RBP28.06■■■□□ 2.08
RAPGEF1-206ENST00000438647 DDX39AO00148 427 aaKnown RBP28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 CAND2O75155 1236 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 ATG7O95352 703 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 SLC26A2P50443 739 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 PPFIA1Q13136 1202 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 NONOQ15233 471 aaKnown RBP eCLIP28.05■■■□□ 2.089e-7■■■■□ 22.5
RAPGEF1-206ENST00000438647 TRIM71Q2Q1W2 868 aaKnown RBP28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 PLPPR4Q7Z2D5 763 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 NSUN7Q8NE18 718 aaKnown RBP28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 LMBR1Q8WVP7 490 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 VWCEQ96DN2 955 aa28.05■■■□□ 2.08
RAPGEF1-206ENST00000438647 DHX15O43143 795 aaKnown RBP28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 THPOP40225 353 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 STAT5BP51692 787 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 ZNF697Q5TEC3 545 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 WNT8BQ93098 351 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 LENG9Q96B70 501 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 PCYT2Q99447 389 aa28.04■■■□□ 2.08
RAPGEF1-206ENST00000438647 CCDC194A0A1B0GVG4 234 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 ZBBXA8MT70 800 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 CCNE2O96020 404 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 ADAM17P78536 824 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 KRT76Q01546 638 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 ZNF618Q5T7W0 954 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 FAM160B1Q5W0V3 765 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 ZNF746Q6NUN9 644 aaPredicted RBP28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 MIS18BP1Q6P0N0 1132 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 MOXD1Q6UVY6 613 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 SMAP1Q8IYB5 467 aaPredicted RBP28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 KIF2CQ99661 725 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 BRMS1Q9HCU9 246 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 CXXC1Q9P0U4 656 aaPredicted RBP28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 SLC4A7Q9Y6M7 1214 aa28.03■■■□□ 2.08
RAPGEF1-206ENST00000438647 SCN5AQ14524 2016 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 TMEM265A0A087WTH1 108 aa28.02■■■□□ 2.08
RAPGEF1-206ENST00000438647 RRN3P2A6NIE6 340 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms