RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ASGR2P07307 311 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 NFKB2Q00653 900 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 IRF9Q00978 393 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 PAN2Q504Q3 1202 aaKnown RBP5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 XP32Q5T750 250 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 C11orf74Q86VG3 221 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 ARRDC4Q8NCT1 418 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 MZB1Q8WU39 189 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 PPP1R16BQ96T49 567 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 TTC1Q99614 292 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 CNTD2Q9H8S5 307 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 RIC8BQ9NVN3 520 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 DTLQ9NZJ0 730 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 MBD1Q9UIS9 605 aaPredicted RBP5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 MCM8Q9UJA3 840 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 FAN1Q9Y2M0 1017 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 RNF114Q9Y508 228 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
LSM1P1-201ENST00000438629 SCDO00767 359 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 BUB1BO60566 1050 aaPredicted RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 ZBTB48P10074 688 aaPredicted RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 FAHP16930 419 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 PMLP29590 882 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 KPNA1P52294 538 aaPredicted RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 HERVK_113P62684 666 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 DLG4P78352 724 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 DSG1Q02413 1049 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 CC2D1AQ6P1N0 951 aaPredicted RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 UBR7Q8N806 425 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 DLG3Q92796 817 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 PCIF1Q9H4Z3 704 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 IFT22Q9H7X7 185 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 PCDHA5Q9Y5H7 936 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 COL4A3BPQ9Y5P4 624 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 B3GALT1Q9Y5Z6 326 aa5.29□□□□□ -1.56
LSM1P1-201ENST00000438629 KRT37O76014 449 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 ENO2P09104 434 aaPredicted RBP5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 CYP2C8P10632 490 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 GLDCP23378 1020 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 LSSP48449 732 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 CDR1P51861 262 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 IL2P60568 153 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 GRIN1Q05586 938 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 FAPQ12884 760 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 TEPPQ6URK8 271 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 SYDE1Q6ZW31 735 aaPredicted RBP5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 NME9Q86XW9 330 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 NOSTRINQ8IVI9 506 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 RBM12BQ8IXT5 1001 aaKnown RBP5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 SMC1BQ8NDV3 1235 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 E2F7Q96AV8 911 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 PCDH12Q9NPG4 1184 aa5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 NOP58Q9Y2X3 529 aaKnown RBP5.28□□□□□ -1.56
LSM1P1-201ENST00000438629 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 NFIBO00712 420 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 FKBP9O95302 570 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 LRG1P02750 347 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 LTFP02788 710 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 C4BPAP04003 597 aaKnown RBP5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 ATP2A2P16615 1042 aaKnown RBP5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 BPIP17213 487 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 FBLN1P23142 703 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 SDHAP31040 664 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 FNTBP49356 437 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 KIF11P52732 1056 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 ANAPC15P60006 121 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 IGBP1P78318 339 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 MESP2Q0VG99 397 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 STRN3Q13033 797 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 SEPT7Q16181 437 aaKnown RBP5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 FKBP9P1Q75LS8 142 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 ZZZ3Q8IYH5 903 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 NXPE1Q8N323 547 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 EFHBQ8N7U6 833 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 ATL2Q8NHH9 583 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 SIGLEC10Q96LC7 697 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 BCAS3Q9H6U6 928 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 OXSMQ9NWU1 459 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 ATP8A1Q9Y2Q0 1164 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 TELO2Q9Y4R8 837 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 SPO11Q9Y5K1 396 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 IRAK3Q9Y616 596 aa5.27□□□□□ -1.57
LSM1P1-201ENST00000438629 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 PRAMEF25A6NGN4 478 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 ZNF891A8MT65 544 aaPredicted RBP5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 ETV2O00321 342 aaPredicted RBP5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 KCNK3O14649 394 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 FOXP2O15409 715 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 ULK1O75385 1050 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 CYP7B1O75881 506 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
LSM1P1-201ENST00000438629 FOXO4P98177 505 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms