RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MXD3Q9BW11 206 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 CNOT10Q9H9A5 744 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 TFR2Q9UP52 801 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 PASKQ96RG2 1323 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 H3BQF6 201 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 BBOX1O75936 387 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 SASH3O75995 380 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 ATP2A2P16615 1042 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 HSPA6P17066 643 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 BMP6P22004 513 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 IFNAR2P48551 515 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 SF3B2Q13435 895 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 E2F4Q16254 413 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 DOK7Q18PE1 504 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 LRCH2Q5VUJ6 765 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 KIFC2Q96AC6 838 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 GPR101Q96P66 508 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 MYCBPQ99417 103 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 DNAJC7Q99615 494 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 BHMT2Q9H2M3 363 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 LRRN2O75325 713 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 CAMTA2O94983 1202 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 POLR2MP0CAP2 368 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 SLC8A1P32418 973 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 VPS41P49754 854 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.24
CSDE1-205ENST00000438362 PDIA5Q14554 519 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 SNCBQ16143 134 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 PKN1Q16512 942 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 NEK9Q8TD19 979 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 ACTR5Q9H9F9 607 aaPredicted RBP7.27□□□□□ -1.24
CSDE1-205ENST00000438362 INTS13Q9NVM9 706 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 NARFQ9UHQ1 456 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 RAB21Q9UL25 225 aa7.27□□□□□ -1.24
CSDE1-205ENST00000438362 A0A1W2PQJ5 194 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 FGGP02679 453 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 KRT15P19012 456 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PDXDC2PQ6P474 469 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CPXCR1Q8N123 301 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MRRFQ96E11 262 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 TEKT3Q9BXF9 490 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 TAF1DQ9H5J8 278 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PACSIN2Q9UNF0 486 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 BAZ2BQ9UIF8 2168 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 POTEB3A0JP26 581 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 POTECB2RU33 542 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 STXBP3O00186 592 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 ZBTB5O15062 677 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 RPS6KA4O75676 772 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 NTSR2O95665 410 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CLTAP09496 248 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 KLK7P49862 253 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 ABCB5Q2M3G0 1257 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 TBC1D9BQ66K14 1250 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 POTEBQ6S5H4 581 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MMGT1Q8N4V1 131 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CCDC63Q8NA47 563 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 RIOK1Q9BRS2 568 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PARVGQ9HBI0 331 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CD209Q9NNX6 404 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 KLHL14Q9P2G3 628 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PLAGL2Q9UPG8 496 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 THRAP3Q9Y2W1 955 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MRPL11Q9Y3B7 192 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MYMKA6NI61 221 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 DKC1O60832 514 aaKnown RBP eCLIP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MYCLP12524 364 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 ADCY8P40145 1251 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 MXRA7P84157 204 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 DR1Q01658 176 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CDC37Q16543 378 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 NAALADL2Q58DX5 795 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PAPD7Q5XG87 772 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 PPP1R18Q6NYC8 613 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 SFR1Q86XK3 245 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 GRK7Q8WTQ7 553 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 CCDC127Q96BQ5 260 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 ATP6V1G3Q96LB4 118 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 LACRTQ9GZZ8 138 aa7.27□□□□□ -1.25
CSDE1-205ENST00000438362 DDX47Q9H0S4 455 aaKnown RBP7.27□□□□□ -1.25
CSDE1-205ENST00000438362 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 LRRIQ3A6PVS8 624 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L15C9J2P7 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L13C9JLJ4 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L11C9JVI0 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L18D6R9N7 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L22D6RA61 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L17D6RBQ6 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 UBAP1LF5GYI3 381 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 THAP12O43422 761 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 ALDH1B1P30837 517 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms