RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 PIH1D3Q9NQM4 214 aaKnown RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 ATP8A1Q9Y2Q0 1164 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 MMTAG2Q9BU76 263 aaKnown RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 PIDD1Q9HB75 910 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 SPOPLQ6IQ16 392 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 CROCCP2Q86T23 111 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 CXorf38Q8TB03 319 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 GPT2Q8TD30 523 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 TM6SF1Q9BZW5 370 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 AK9Q5TCS8 1911 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 GSTA4O15217 222 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 BRD1O95696 1058 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 SLC7A5Q01650 507 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 PPP6R3Q5H9R7 873 aaPredicted RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
SHPRH-206ENST00000438092 HVCN1Q96D96 273 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 TTC25Q96NG3 672 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 WDR11Q9BZH6 1224 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 MAN1B1Q9UKM7 699 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 SLC8A2Q9UPR5 921 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 CAPN7Q9Y6W3 813 aa11.18□□□□□ -0.62
SHPRH-206ENST00000438092 ABCC4O15439 1325 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ATICP31939 592 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 INPP1P49441 399 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 CCDC38Q502W7 563 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 EXOC8Q8IYI6 725 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 P2RX5Q93086 422 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 SDCCAG3Q96C92 435 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 NEMP1O14524 444 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 MED7O43513 233 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 NMT2O60551 498 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PPFIA4O75335 1185 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 EN1Q05925 392 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ACCSLQ4AC99 568 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PSPC1Q8WXF1 523 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PPWD1Q96BP3 646 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 JPH2Q9BR39 696 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 AP1M1Q9BXS5 423 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ITM2BQ9Y287 266 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PCDHB6Q9Y5E3 794 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ECE2O60344 883 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 THOC1Q96FV9 657 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 SYNDIG1Q9H7V2 258 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 SARS2Q9NP81 518 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PTPRTO14522 1441 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 EFCAB8A8MWE9 144 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 GRAPQ13588 217 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 GRAPLQ8TC17 118 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 EPB41L5Q9HCM4 733 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 HOMER3Q9NSC5 361 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 BLMP54132 1417 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 WDR64B1ANS9 1081 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 MYBP10242 640 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 BPIFB4P59827 614 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 DPCR1Q3MIW9 517 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 MASTLQ96GX5 879 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 GJB4Q9NTQ9 266 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 INTUQ9ULD6 942 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 SART1O43290 800 aaKnown RBP11.17□□□□□ -0.62
SHPRH-206ENST00000438092 RASGRF1Q13972 1273 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 DCAF4L1Q3SXM0 396 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 METP08581 1390 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 PALLDQ8WX93 1383 aa11.17□□□□□ -0.62
SHPRH-206ENST00000438092 ATP8B3O60423 1300 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 PZPP20742 1482 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 PIK3R2O00459 728 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 GAP43P17677 238 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 YWHAHQ04917 246 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 TBC1D9BQ66K14 1250 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 RTKN2Q8IZC4 609 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 WHAMMP3Q1A5X7 153 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SLC44A5Q8NCS7 719 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 FBXO18Q8NFZ0 1043 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 NCF2P19878 526 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SNRNP48Q6IEG0 339 aaKnown RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 PCGF5Q86SE9 256 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 N4BP2L2Q92802 583 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-206ENST00000438092 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 CIAO1O76071 339 aa11.16□□□□□ -0.62
SHPRH-206ENST00000438092 SEC31AO94979 1220 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms