RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 MYBP10242 640 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 RPA1P27694 616 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 CASP14P31944 242 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 CIITAP33076 1130 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 APBA1Q02410 837 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 CNNM4Q6P4Q7 775 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 ELOA2Q8IYF1 753 aaPredicted RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 GCNT3O95395 438 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 TPM3P06753 285 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 HSD17B4P51659 736 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
LINC01516-201ENST00000436140 COL2A1P02458 1487 aaPredicted RBP12.11□□□□□ -0.47
LINC01516-201ENST00000436140 USO1O60763 962 aaKnown RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 CCZ1BP86790 482 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 CCZ1P86791 482 aaPredicted RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 TRAF1Q13077 416 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 NR1I3Q14994 352 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 UGCGQ16739 394 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 ANKRD13AQ8IZ07 590 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 SLC12A3P55017 1021 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 GIT2Q14161 759 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 PPFIBP1Q86W92 1011 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 SMCR8Q8TEV9 937 aaPredicted RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 ZNF668Q96K58 619 aaPredicted RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
LINC01516-201ENST00000436140 HSD17B14Q9BPX1 270 aa12.1□□□□□ -0.47
LINC01516-201ENST00000436140 BACH1O14867 736 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CCNE1P24864 410 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 TBC1D8BQ0IIM8 1120 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 MBOAT7Q96N66 472 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 NAP1L4Q99733 375 aaKnown RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 TISP43B9A030 160 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CYP3A4P08684 503 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 GJA5P36382 358 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 KCNB1Q14721 858 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 RINT1Q6NUQ1 792 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 KIFC3Q9BVG8 833 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 GREB1LQ9C091 1923 aaPredicted RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 PLA2G6O60733 806 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 FAM13AO94988 1023 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 CCNE2O96020 404 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 SLC5A5Q92911 643 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 TFR2Q9UP52 801 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
LINC01516-201ENST00000436140 BRCA1P38398 1863 aaKnown RBP12.09□□□□□ -0.47
LINC01516-201ENST00000436140 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 CELF2O95319 508 aaKnown RBP12.08□□□□□ -0.48
LINC01516-201ENST00000436140 HERVK_113P62684 666 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 CCDC40Q4G0X9 1142 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 ERO1BQ86YB8 467 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 ANKRD13CQ8N6S4 541 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 REPS2Q8NFH8 660 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
LINC01516-201ENST00000436140 AGO4Q9HCK5 861 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms