RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
UBE3B-203ENST00000434735 KCNK9Q9NPC2 374 aa13.23□□□□□ -0.29
UBE3B-203ENST00000434735 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 IFNB1P01574 187 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 STAT1P42224 750 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 FAM160A1Q05DH4 1040 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 ADCY1Q08828 1119 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 PDCD6IPQ8WUM4 868 aaKnown RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 PLEKHF1Q96S99 279 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 LZTFL1Q9NQ48 299 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 CYP2C9P11712 490 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 ATL3Q6DD88 541 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 RPUSD2Q8IZ73 545 aaKnown RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 CCNYQ8ND76 341 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 SLC9A2Q9UBY0 812 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 TLDC2A0PJX2 215 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 SF3B3Q15393 1217 aaKnown RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 SEC24BO95487 1268 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 GNA14O95837 355 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 MYL7Q01449 175 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 SP3Q02447 781 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 CYP4F22Q6NT55 531 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 PALM2Q8IXS6 379 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
UBE3B-203ENST00000434735 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-203ENST00000434735 PLSCR1O15162 318 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 SRGNP10124 158 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 MYL5Q02045 173 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 HAUS6Q7Z4H7 955 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 NUCKS1Q9H1E3 243 aaKnown RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 RAB20Q9NX57 234 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 VIMP08670 466 aaKnown RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 SKILP12757 684 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 SAT1P21673 171 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 GBP6Q6ZN66 633 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 CLEC10AQ8IUN9 316 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 NDUFAF2Q8N183 169 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 EEF2KMTQ96G04 330 aa13.21□□□□□ -0.29
UBE3B-203ENST00000434735 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-203ENST00000434735 PGK2P07205 417 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 SETDB1Q15047 1291 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 LRRC41Q15345 812 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 ZNF34Q8IZ26 560 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 LRG1P02750 347 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 SUPT20HL2P0C7V6 817 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 GAP43P17677 238 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 SURF1Q15526 300 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.3
UBE3B-203ENST00000434735 SFMBT2Q5VUG0 894 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 MYLK4Q86YV6 388 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 GAS2L1Q99501 681 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 TMEM206Q9H813 350 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 PI4K2BG5E9Z4 385 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 NTSR2O95665 410 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 TBC1D8O95759 1140 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ATICP31939 592 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 AP3B2Q13367 1082 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ZNF589Q86UQ0 364 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 DGKHQ86XP1 1220 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ADCY3O60266 1144 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ZNF202O95125 648 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 VAV2P52735 878 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 SATB1Q01826 763 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 RRAGAQ7L523 313 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ADAT2Q7Z6V5 191 aaKnown RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-203ENST00000434735 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 CLGNO14967 610 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 CYBBP04839 570 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ABCD1P33897 745 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ST8SIA6P61647 398 aa13.2□□□□□ -0.3
UBE3B-203ENST00000434735 ZNF667Q5HYK9 610 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms