RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 FAM107AO95990 144 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SLC9A1P19634 815 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 KRT71Q3SY84 523 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 ZNF34Q8IZ26 560 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 NSUN4Q96CB9 384 aaKnown RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 PNMA5Q96PV4 448 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 PAIP2Q9BPZ3 127 aaKnown RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 ANAPC4Q9UJX5 808 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 RASSF9O75901 435 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 ADCY1Q08828 1119 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 ZNF211Q13398 564 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 UBE4AQ14139 1066 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 UBE2SQ16763 222 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SLC30A10Q6XR72 485 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 FUKQ8N0W3 1084 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 INPP4AQ96PE3 977 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 TMBIM4Q9HC24 238 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CEP83Q9Y592 693 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 GMNCA6NCL1 334 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 KLRF2D3W0D1 207 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 SART1O43290 800 aaKnown RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CLTAP09496 248 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CALM1P0DP23 149 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CALM2P0DP24 149 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CALM3P0DP25 149 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 MAP2K1Q02750 393 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 KLHL30Q0D2K2 578 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 MAN2A1Q16706 1144 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 HIBCHQ6NVY1 386 aaPredicted RBP11.47□□□□□ -0.57
SCAF4-203ENST00000434667 UTRNP46939 3433 aa11.47□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 M0R2N6 131 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 ELF1P32519 619 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 LRRC55Q6ZSA7 311 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 SV2BQ7L1I2 683 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC25Q86WR0 208 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 PARP9Q8IXQ6 854 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 RETREG2Q8NC44 543 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 BTAF1O14981 1849 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CALML3P27482 149 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 PTK2Q05397 1052 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 PPP1R7Q15435 360 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CDC37Q16543 378 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-203ENST00000434667 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-203ENST00000434667 FAM114A1Q8IWE2 563 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 MGARPQ8TDB4 240 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 TGFBRAP1Q8WUH2 860 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 GLG1Q92896 1179 aa11.46□□□□□ -0.57
SCAF4-203ENST00000434667 E9PMD0 336 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 CHUKO15111 745 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 TSPY3P0CV98 308 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 TSPY8P0CW00 308 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 SCTRP47872 440 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.58
SCAF4-203ENST00000434667 SNX29Q8TEQ0 813 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.58
SCAF4-203ENST00000434667 CARD10Q9BWT7 1032 aa11.46□□□□□ -0.58
SCAF4-203ENST00000434667 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.58
SCAF4-203ENST00000434667 CAND2O75155 1236 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 ABCB4P21439 1286 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 ANKRD20A8PQ5CZ79 823 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 MEI1Q5TIA1 1274 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 PRCCQ92733 491 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 MCM8Q9UJA3 840 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 STK38LQ9Y2H1 464 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 A8MUI8 341 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 H0YGN5 161 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 NEFHP12036 1026 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 TNNI2P48788 182 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 LRRC14Q15048 493 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 CNNM4Q6P4Q7 775 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 C6orf89Q6UWU4 347 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 ZNF662Q6ZS27 426 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 RPAINQ86UA6 219 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 METTL13Q8N6R0 699 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 TAF1DQ9H5J8 278 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 OSGEPQ9NPF4 335 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 ATAD5Q96QE3 1844 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms