RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 MAGEA10P43363 369 aaPredicted RBP20.85■□□□□ 0.93
HLA-F-220ENST00000434407 KIAA0753Q2KHM9 967 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 DIS3L2Q8IYB7 885 aaKnown RBP20.85■□□□□ 0.93
HLA-F-220ENST00000434407 ZNF577Q9BSK1 485 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 TUT1Q9H6E5 874 aaKnown RBP20.85■□□□□ 0.93
HLA-F-220ENST00000434407 TBC1D22BQ9NU19 505 aa20.85■□□□□ 0.93
HLA-F-220ENST00000434407 MSH4O15457 936 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 LGR5O75473 907 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 HOXC8P31273 242 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 TCF7P36402 384 aaPredicted RBP20.84■□□□□ 0.93
HLA-F-220ENST00000434407 SP4Q02446 784 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 CUL4AQ13619 759 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 PPP4R3AQ6IN85 833 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 PIK3AP1Q6ZUJ8 805 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 NEK8Q86SG6 692 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 FAM184AQ8NB25 1140 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 CTAGE1Q96RT6 745 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
HLA-F-220ENST00000434407 TRMT13Q9NUP7 481 aaKnown RBP20.84■□□□□ 0.93
HLA-F-220ENST00000434407 GTF2IRD1Q9UHL9 959 aa20.84■□□□□ 0.93
HLA-F-220ENST00000434407 EMSYQ7Z589 1322 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 TDP2O95551 362 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 CCNE2O96020 404 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 SUPT20HL2P0C7V6 817 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 BMP8BP34820 402 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 FOSBP53539 338 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 ACTR2P61160 394 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 TRIM50Q86XT4 487 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 PPP1R13LQ8WUF5 828 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 PCYT2Q99447 389 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 PCDH10Q9P2E7 1040 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 HDAC6Q9UBN7 1215 aa20.83■□□□□ 0.93
HLA-F-220ENST00000434407 IGKV6D-21A0A0A0MT36 114 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 TIMP1P01033 207 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 GCFC2P16383 781 aaKnown RBP20.82■□□□□ 0.92
HLA-F-220ENST00000434407 GDF6Q6KF10 455 aaPredicted RBP20.82■□□□□ 0.92
HLA-F-220ENST00000434407 ABHD15Q6UXT9 468 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 ETNPPLQ8TBG4 499 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 RIT2Q99578 217 aa20.82■□□□□ 0.92
HLA-F-220ENST00000434407 ZNF215Q9UL58 517 aaPredicted RBP20.82■□□□□ 0.92
HLA-F-220ENST00000434407 LAMA3Q16787 3333 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 GUCY1B3Q02153 619 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 SAFBQ15424 915 aaKnown RBP eCLIP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 LETM2Q2VYF4 491 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 FAM47CQ5HY64 1035 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 UTP14CQ5TAP6 766 aaKnown RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 ZNF746Q6NUN9 644 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 CHRDL2Q6WN34 429 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 NAP1L4Q99733 375 aaKnown RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 NOC4LQ9BVI4 516 aaKnown RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 FOXP1Q9H334 677 aaPredicted RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 SMARCAD1Q9H4L7 1026 aa20.81■□□□□ 0.92
HLA-F-220ENST00000434407 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
HLA-F-220ENST00000434407 SLC37A4O43826 429 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 PSMD10O75832 226 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 RAG1P15918 1043 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 MDM2Q00987 491 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-220ENST00000434407 KRT76Q01546 638 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 HIC1Q14526 733 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 B3GNT9Q6UX72 402 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 PLPPR4Q7Z2D5 763 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 BADQ92934 168 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 UIMC1Q96RL1 719 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-220ENST00000434407 RNPEPQ9H4A4 650 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 KCNMB3Q9NPA1 279 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 COLQQ9Y215 455 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-220ENST00000434407 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
HLA-F-220ENST00000434407 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-220ENST00000434407 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
HLA-F-220ENST00000434407 DDX39AO00148 427 aaKnown RBP20.79■□□□□ 0.92
HLA-F-220ENST00000434407 SMIM10L2AP0DMW4 78 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 SMIM10L2BP0DMW5 78 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 CYP2C9P11712 490 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 GJB2P29033 226 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 CHMP4BP1P59074 171 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 ADAM17P78536 824 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 PTGISQ16647 500 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 MFSD5Q6N075 450 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 SMAP1Q8IYB5 467 aaPredicted RBP20.79■□□□□ 0.92
HLA-F-220ENST00000434407 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 SNX21Q969T3 373 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 ERAP1Q9NZ08 941 aa20.79■□□□□ 0.92
HLA-F-220ENST00000434407 TBX3O15119 743 aa20.78■□□□□ 0.92
HLA-F-220ENST00000434407 CCNT1O60563 726 aaKnown RBP20.78■□□□□ 0.92
HLA-F-220ENST00000434407 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.92
HLA-F-220ENST00000434407 RBL2Q08999 1139 aa20.78■□□□□ 0.92
HLA-F-220ENST00000434407 FAM20AQ96MK3 541 aa20.78■□□□□ 0.92
HLA-F-220ENST00000434407 TET1Q8NFU7 2136 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 PITPNM1O00562 1244 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 GAS7O60861 476 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 SLC26A2P50443 739 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 STAT5BP51692 787 aa20.77■□□□□ 0.92
HLA-F-220ENST00000434407 ZNF200P98182 395 aaPredicted RBP20.77■□□□□ 0.92
HLA-F-220ENST00000434407 LRCH2Q5VUJ6 765 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms