RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 CCDC170Q8IYT3 715 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 RAD54LQ92698 747 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 PAIP2Q9BPZ3 127 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 RTN2O75298 545 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 MOCS3O95396 460 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 RWDD2BP57060 319 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 TUBB4BP68371 445 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 FAM76AQ8TAV0 307 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 ARHGAP20Q9P2F6 1191 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 STK17AQ9UEE5 414 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 E9PMD0 336 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 EDIL3O43854 480 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 GGCXP38435 758 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 PPP1R2P41236 205 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 MRPL12P52815 198 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 SNAP25P60880 206 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 C2orf54Q08AI8 447 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 CRY2Q49AN0 593 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 TSG101Q99816 390 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 LAMB2P55268 1798 aa13.44□□□□□ -0.26
SEMA3F-206ENST00000434342 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PDE2AO00408 941 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 KIF11P52732 1056 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 VAV2P52735 878 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 MAN2A1Q16706 1144 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 CERS5Q8N5B7 392 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 CUL5Q93034 780 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 TMEM165Q9HC07 324 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 CAPN6Q9Y6Q1 641 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 NPHP3-ACAD11A0A0J9YXS1 232 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PVALEFA0A1B0GWK0 134 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 SMARCA1P28370 1054 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 USP14P54578 494 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 NFIAQ12857 509 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 SHROOM1Q2M3G4 852 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 GUF1Q8N442 669 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 SMARCAL1Q9NZC9 954 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PCDHA13Q9Y5I0 950 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 COL22A1Q8NFW1 1626 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 BUB1O43683 1085 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 TACC1O75410 805 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 FGFR1OPO95684 399 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 MAGEA1P43355 309 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 HERC4Q5GLZ8 1057 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PAPD7Q5XG87 772 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 CCDC84Q86UT8 332 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 PLAGL2Q9UPG8 496 aa13.43□□□□□ -0.26
SEMA3F-206ENST00000434342 RREB1Q92766 1687 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 GAKO14976 1311 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 ATP1A2P50993 1020 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 APBA1Q02410 837 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 DDR1Q08345 913 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 STAT3P40763 770 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 RANBP1P43487 201 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 RASSF7Q02833 373 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 CKAP4Q07065 602 aaKnown RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 PDCLQ13371 301 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 PDIA5Q14554 519 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 FAM26FQ5R3K3 315 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 HAS1Q92839 578 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 CAPS2Q9BXY5 557 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 FGFBP2Q9BYJ0 223 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 LGR5O75473 907 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 HLA-DOAP06340 250 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 FNTAP49354 379 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 GFPT1Q06210 699 aaPredicted RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 COASYQ13057 564 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 FNBP4Q8N3X1 1017 aaPredicted RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 COG1Q8WTW3 980 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 RIC8AQ9NPQ8 531 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 A1CFQ9NQ94 594 aaKnown RBP13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 SIK3Q9Y2K2 1263 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 PCDHA1Q9Y5I3 950 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms