RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CHPFQ8IZ52 775 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 LUC7LQ9NQ29 371 aaKnown RBP7.88□□□□□ -1.15
USP54-206ENST00000433394 GOLGA6AQ9NYA3 693 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 MYOTQ9UBF9 498 aa7.88□□□□□ -1.15
USP54-206ENST00000433394 K7ESF4 209 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 MAN2B1O00754 1011 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 KCNK3O14649 394 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 FURINP09958 794 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 TMEM62Q0P6H9 643 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 EMC4Q5J8M3 183 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 ZNF574Q6ZN55 896 aaPredicted RBP7.87□□□□□ -1.15
USP54-206ENST00000433394 FRMD7Q6ZUT3 714 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 SPRED2Q7Z698 418 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.87□□□□□ -1.15
USP54-206ENST00000433394 MYLIPQ8WY64 445 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 E2F7Q96AV8 911 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 C8orf48Q96LL4 319 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 RIC8BQ9NVN3 520 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 ZIM2Q9NZV7 527 aa7.87□□□□□ -1.15
USP54-206ENST00000433394 H2AFY2Q9P0M6 372 aaPredicted RBP7.87□□□□□ -1.15
USP54-206ENST00000433394 GABRDO14764 452 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 KIF3BO15066 747 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 TSPAN6O43657 245 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 PPP1R11O60927 126 aaPredicted RBP7.86□□□□□ -1.15
USP54-206ENST00000433394 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 SSTR4P31391 388 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 RAB27AP51159 221 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 ADCY1Q08828 1119 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 XP32Q5T750 250 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 BTBD8Q5XKL5 378 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 PGM2L1Q6PCE3 622 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 DTX1Q86Y01 620 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 NOSTRINQ8IVI9 506 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 ZNF610Q8N9Z0 462 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 HOOK2Q96ED9 719 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
USP54-206ENST00000433394 CD244Q9BZW8 370 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 USP36Q9P275 1121 aaKnown RBP7.86□□□□□ -1.15
USP54-206ENST00000433394 B3GALT1Q9Y5Z6 326 aa7.86□□□□□ -1.15
USP54-206ENST00000433394 GOLGA8AA7E2F4 631 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 GOLGA8BA8MQT2 603 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 SLC27A2O14975 620 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 AKAP10O43572 662 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 PRC1O43663 620 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 WNT11O96014 354 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 HPXP02790 462 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 ZBTB48P10074 688 aaPredicted RBP7.85□□□□□ -1.15
USP54-206ENST00000433394 PNLIPP16233 465 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 FNTBP49356 437 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 LRRC32Q14392 662 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 NR1I3Q14994 352 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 TERF2Q15554 542 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 ABCB5Q2M3G0 1257 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 CPZQ66K79 652 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 TTLL7Q6ZT98 887 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 MILR1Q7Z6M3 343 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 CAMKK2Q96RR4 588 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 PRDM7Q9NQW5 492 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 C14orf119Q9NWQ9 140 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 MKS1Q9NXB0 559 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 EBF1Q9UH73 591 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 ZNF180Q9UJW8 692 aa7.85□□□□□ -1.15
USP54-206ENST00000433394 PRAMEF25A6NGN4 478 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 CYBBP04839 570 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 MPOP05164 745 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 PTPN1P18031 435 aaKnown RBP7.84□□□□□ -1.15
USP54-206ENST00000433394 VCAM1P19320 739 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 CEBPAP49715 358 aaPredicted RBP7.84□□□□□ -1.15
USP54-206ENST00000433394 TUSC3Q13454 348 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 SLC9A5Q14940 896 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 CLUL1Q15846 466 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 PAQR3Q6TCH7 311 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 MYO1HQ8N1T3 1032 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 ACAP3Q96P50 834 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 PLCD4Q9BRC7 762 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 TRIM8Q9BZR9 551 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 PCMTD2Q9NV79 361 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 ASH2LQ9UBL3 628 aa7.84□□□□□ -1.15
USP54-206ENST00000433394 LUC7L2Q9Y383 392 aaKnown RBP7.84□□□□□ -1.15
USP54-206ENST00000433394 TCRBV5S4A2TA0A5A2 114 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 SRGAP3O43295 1099 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 PSPNO60542 156 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
USP54-206ENST00000433394 SCGB1D2O95969 90 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 MT-CO1P00395 513 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 MSL3P1P0C860 447 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 GLI4P10075 376 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 ATF3P18847 181 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 RECQLP46063 649 aaPredicted RBP7.83□□□□□ -1.16
USP54-206ENST00000433394 EPHA5P54756 1037 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 SCAND1P57086 179 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 SMAD3P84022 425 aaKnown RBP7.83□□□□□ -1.16
USP54-206ENST00000433394 SMAD2Q15796 467 aaKnown RBP7.83□□□□□ -1.16
USP54-206ENST00000433394 OLFML2BQ68BL8 750 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 TIGD7Q6NT04 549 aaPredicted RBP7.83□□□□□ -1.16
USP54-206ENST00000433394 C7orf31Q8N865 590 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 DLG3Q92796 817 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 DDX11Q96FC9 970 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 FUBP3Q96I24 572 aaKnown RBP eCLIP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms