RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.49□□□□□ -1.05
CNKSR3-202ENST00000433165 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
CNKSR3-202ENST00000433165 A0A1W2PQC6 194 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 TTC26A0AVF1 554 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 C5orf60A6NFR6 353 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 HMGB1P1B2RPK0 211 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 DNAJC8O75937 253 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 SEC24CP53992 1094 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PRMT2P55345 433 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 ITGB3BPQ13352 177 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 SPRED3Q2MJR0 410 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 TCP11X2Q5H9J9 407 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 KCTD16Q68DU8 428 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 APOA5Q6Q788 366 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RALYLQ86SE5 291 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RASSF8Q8NHQ8 419 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RSRC1Q96IZ7 334 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 ATP6V1G3Q96LB4 118 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PARK7Q99497 189 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 CRNKL1Q9BZJ0 848 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 MCOLN1Q9GZU1 580 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 EBF2Q9HAK2 575 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 SPATS2LQ9NUQ6 558 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 TSKSQ9UJT2 592 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RANBP6O60518 1105 aaKnown RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 FGAP02671 866 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 CYLC1P35663 651 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 HAND2P61296 217 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 NAA25Q14CX7 972 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PI16Q6UXB8 463 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 MIGA2Q7L4E1 593 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 CRACR2BQ8N4Y2 399 aaPredicted RBP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PHKBQ93100 1093 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PAGE5Q96GU1 130 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 SCLT1Q96NL6 688 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 VPS16Q9H269 839 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 JADE2Q9NQC1 790 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 HAUS2Q9NVX0 235 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 AATFQ9NY61 560 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 RWDD2AQ9UIY3 292 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 PNMA3Q9UL41 463 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 CAPN11Q9UMQ6 739 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 TFR2Q9UP52 801 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 CTNND2Q9UQB3 1225 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 MYH7P12883 1935 aa8.48□□□□□ -1.05
CNKSR3-202ENST00000433165 A0A087X0B3 334 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 MAGEB6P1A0A0J9YX57 407 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 E7EVH7 732 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 MMP1P03956 469 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 GHRP10912 638 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SCTRP47872 440 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 VAV2P52735 878 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 E2F5Q15329 346 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CFAP58Q5T655 872 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 AP1ARQ63HQ0 302 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 FBXO46Q6PJ61 603 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SAMD1Q6SPF0 538 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CRELD2Q6UXH1 353 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 USP49Q70CQ1 688 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CCDC170Q8IYT3 715 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 MAGEB6Q8N7X4 407 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 ZNF296Q8WUU4 475 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 MS4A4AQ96JQ5 239 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 TSGA10Q9BZW7 698 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CSRNP2Q9H175 543 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 FOXP1Q9H334 677 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 PIH1D3Q9NQM4 214 aaKnown RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 GDF3Q9NR23 364 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 HOMER3Q9NSC5 361 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 ETAA1Q9NY74 926 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 TAB2Q9NYJ8 693 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 LUC7L2Q9Y383 392 aaKnown RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 MYH10P35580 1976 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 KCNJ18B7U540 433 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 TCP1P17987 556 aaKnown RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 GCKP35557 465 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 GJA5P36382 358 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SP3Q02447 781 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 KCNJ12Q14500 433 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SLMAPQ14BN4 828 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 ARFGAP2Q8N6H7 521 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 CCDC43Q96MW1 224 aaKnown RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 SLC12A6Q9UHW9 1150 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 NID2Q14112 1375 aa8.47□□□□□ -1.05
CNKSR3-202ENST00000433165 FLT1P17948 1338 aa8.46□□□□□ -1.05
CNKSR3-202ENST00000433165 FRMD3A2A2Y4 597 aa8.46□□□□□ -1.05
CNKSR3-202ENST00000433165 GMNCA6NCL1 334 aa8.46□□□□□ -1.05
CNKSR3-202ENST00000433165 BTBD18B2RXH4 712 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms