RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 DNM2P50570 870 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 ZCWPW2Q504Y3 356 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 MIIPQ5JXC2 388 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 LRRC55Q6ZSA7 311 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 REXO1L1PQ8IX06 675 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 CCDC51Q96ER9 411 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 C12orf42Q96LP6 360 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 TRERF1Q96PN7 1200 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 TEKT3Q9BXF9 490 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 LCTP09848 1927 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 FRMPD4Q14CM0 1322 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 IPO5O00410 1097 aaKnown RBP21.71■■□□□ 1.07
VRK2-205ENST00000432057 TPH2Q8IWU9 490 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 TAAR1Q96RJ0 339 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 NOC4LQ9BVI4 516 aaKnown RBP21.71■■□□□ 1.07
VRK2-205ENST00000432057 RUSC1Q9BVN2 902 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 WDR11Q9BZH6 1224 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 SLITRK3O94933 977 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
VRK2-205ENST00000432057 NOL9Q5SY16 702 aaKnown RBP21.71■■□□□ 1.07
VRK2-205ENST00000432057 DLK2Q6UY11 383 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 KRT26Q7Z3Y9 468 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 NELFCDQ8IXH7 590 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 PIGOQ8TEQ8 1089 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 DESI2Q9BSY9 194 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 NAA15Q9BXJ9 866 aaKnown RBP21.71■■□□□ 1.07
VRK2-205ENST00000432057 ABHD10Q9NUJ1 306 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 RNF181Q9P0P0 153 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 DOCK5Q9H7D0 1870 aa21.71■■□□□ 1.07
VRK2-205ENST00000432057 KIF2AO00139 706 aaPredicted RBP21.7■■□□□ 1.06
VRK2-205ENST00000432057 DDX39AO00148 427 aaKnown RBP21.7■■□□□ 1.06
VRK2-205ENST00000432057 ZSCAN12O43309 604 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 FDX1P10109 184 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 EIF2AK2P19525 551 aaKnown RBP21.7■■□□□ 1.06
VRK2-205ENST00000432057 PCNX4Q63HM2 1172 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 FOXR2Q6PJQ5 311 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 B3GNT9Q6UX72 402 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 RAD9BQ6WBX8 426 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 SFR1Q86XK3 245 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 REPS2Q8NFH8 660 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 SCFD1Q8WVM8 642 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 RNF146Q9NTX7 359 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 PAXBP1Q9Y5B6 917 aa21.7■■□□□ 1.06
VRK2-205ENST00000432057 RSPH10B2B2RC85 870 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 FGFR1OPO95684 399 aaKnown RBP21.69■■□□□ 1.06
VRK2-205ENST00000432057 RSPH10BP0C881 870 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 FECHP22830 423 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 MRPS9P82933 396 aaKnown RBP21.69■■□□□ 1.06
VRK2-205ENST00000432057 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 SUPT20HL1Q3ZLR7 823 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 NSMFQ6X4W1 530 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.69■■□□□ 1.06
VRK2-205ENST00000432057 KCNH7Q9NS40 1196 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 MAP3K20Q9NYL2 800 aaKnown RBP21.69■■□□□ 1.06
VRK2-205ENST00000432057 RIPK3Q9Y572 518 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 C19orf81C9J6K1 198 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 BCRP11274 1271 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 DSG3P32926 999 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 KLK7P49862 253 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 CASP5P51878 434 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 TBC1D8BQ0IIM8 1120 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 SYCP1Q15431 976 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 NIPA1Q7RTP0 329 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 RIT2Q99578 217 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 WRAP73Q9P2S5 460 aaPredicted RBP21.69■■□□□ 1.06
VRK2-205ENST00000432057 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
VRK2-205ENST00000432057 TTC26A0AVF1 554 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 ZBTB39O15060 712 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 USP2O75604 605 aaPredicted RBP21.68■■□□□ 1.06
VRK2-205ENST00000432057 GTF2F1P35269 517 aaKnown RBP eCLIP21.68■■□□□ 1.06
VRK2-205ENST00000432057 KRT9P35527 623 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 PGM5Q15124 567 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 EPHA7Q15375 998 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 KCTD17Q8N5Z5 321 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 SAMD3Q8N6K7 520 aa21.68■■□□□ 1.06
VRK2-205ENST00000432057 PURBQ96QR8 312 aaKnown RBP21.68■■□□□ 1.06
VRK2-205ENST00000432057 ADARB2Q9NS39 739 aaKnown RBP21.68■■□□□ 1.06
VRK2-205ENST00000432057 A0A0G2JMZ2 1700 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 SNRNP48Q6IEG0 339 aaKnown RBP21.67■■□□□ 1.06
VRK2-205ENST00000432057 RINT1Q6NUQ1 792 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 SYT10Q6XYQ8 523 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 KCTD10Q9H3F6 313 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 BCAS3Q9H6U6 928 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 AGO4Q9HCK5 861 aaKnown RBP21.67■■□□□ 1.06
VRK2-205ENST00000432057 POLD4Q9HCU8 107 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 AFG3L2Q9Y4W6 797 aa21.67■■□□□ 1.06
VRK2-205ENST00000432057 ADM5C9JUS6 153 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 TRAF5O00463 557 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 TBCAO75347 108 aaKnown RBP21.66■■□□□ 1.06
VRK2-205ENST00000432057 ERVK-24P63145 666 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 ITGB3BPQ13352 177 aaPredicted RBP21.66■■□□□ 1.06
VRK2-205ENST00000432057 MAN2A1Q16706 1144 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 VWA3BQ502W6 1294 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 BANK1Q8NDB2 785 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 KIF18AQ8NI77 898 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 LXNQ9BS40 222 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 JADE2Q9NQC1 790 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms