RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 C17orf102A2RUQ5 167 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 LINC01553A4QN01 128 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 PIK3CDO00329 1044 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
RPL28-204ENST00000431533 CAND2O75155 1236 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 STAM2O75886 525 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 UBA1P22314 1058 aaKnown RBP17.59■□□□□ 0.41
RPL28-204ENST00000431533 PUS10Q3MIT2 529 aaKnown RBP17.59■□□□□ 0.41
RPL28-204ENST00000431533 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
RPL28-204ENST00000431533 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
RPL28-204ENST00000431533 SPDYE3A6NKU9 549 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 H3BRB1 525 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 SP2Q02086 613 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 FUT2Q10981 343 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 NEDD9Q14511 834 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
RPL28-204ENST00000431533 FAM117BQ6P1L5 589 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 RUFY3Q7L099 469 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
RPL28-204ENST00000431533 SERINC5Q86VE9 423 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 MYOCDQ8IZQ8 938 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 SEPT8Q92599 483 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 ATP6V0A1Q93050 837 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 LRFN3Q9BTN0 628 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
RPL28-204ENST00000431533 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
RPL28-204ENST00000431533 UBE2ZQ9H832 354 aaPredicted RBP17.58■□□□□ 0.4
RPL28-204ENST00000431533 RAPGEFL1Q9UHV5 662 aa17.58■□□□□ 0.4
RPL28-204ENST00000431533 TRANK1O15050 2925 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 CCDC196A0A1B0GTZ2 297 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
RPL28-204ENST00000431533 RCAN1P53805 252 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 CCT2P78371 535 aaKnown RBP17.57■□□□□ 0.4
RPL28-204ENST00000431533 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 DBF4BQ8NFT6 615 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 PGBD1Q96JS3 809 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
RPL28-204ENST00000431533 EPHX3Q9H6B9 360 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 FAM50BQ9Y247 325 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
RPL28-204ENST00000431533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.56■□□□□ 0.4
RPL28-204ENST00000431533 STXBP3O00186 592 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 GPR37L1O60883 481 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 ADCY7P51828 1080 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 SP4Q02446 784 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 LEXMQ3ZCV2 418 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 TIGD5Q53EQ6 642 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 PLEKHG4Q58EX7 1191 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 PCNX4Q63HM2 1172 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 NLRX1Q86UT6 975 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 APBB2Q92870 758 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 PHKBQ93100 1093 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 INPP4AQ96PE3 977 aaPredicted RBP17.56■□□□□ 0.4
RPL28-204ENST00000431533 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 BCAS3Q9H6U6 928 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
RPL28-204ENST00000431533 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 ZNF215Q9UL58 517 aaPredicted RBP17.56■□□□□ 0.4
RPL28-204ENST00000431533 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 MUC3AQ02505 3323 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 PTPRSQ13332 1948 aa17.56■□□□□ 0.4
RPL28-204ENST00000431533 SMCO2A6NFE2 343 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 FIBPO43427 364 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 HTRA4P83105 476 aaPredicted RBP17.55■□□□□ 0.4
RPL28-204ENST00000431533 ZNF200P98182 395 aaPredicted RBP17.55■□□□□ 0.4
RPL28-204ENST00000431533 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
RPL28-204ENST00000431533 SEMA3FQ13275 785 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 TRAF7Q6Q0C0 670 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 CYFIP1Q7L576 1253 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 SPRED2Q7Z698 418 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 MRPL38Q96DV4 380 aaKnown RBP17.55■□□□□ 0.4
RPL28-204ENST00000431533 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 EHMT1Q9H9B1 1298 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 PKD2L1Q9P0L9 805 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 SIP14410 1827 aa17.55■□□□□ 0.4
RPL28-204ENST00000431533 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
RPL28-204ENST00000431533 SPATA31C2B4DYI2 1134 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 LGALS2P05162 132 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 SMIM10L2AP0DMW4 78 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 SMIM10L2BP0DMW5 78 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 ICAM3P32942 547 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 TOB2Q14106 344 aaPredicted RBP17.54■□□□□ 0.4
RPL28-204ENST00000431533 MBTPS1Q14703 1052 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 XRRA1Q6P2D8 792 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 METTL7BQ6UX53 244 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
RPL28-204ENST00000431533 GIMAP8Q8ND71 665 aaPredicted RBP17.54■□□□□ 0.4
RPL28-204ENST00000431533 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
RPL28-204ENST00000431533 RIC8AQ9NPQ8 531 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 TMEM260Q9NX78 707 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 BARHL2Q9NY43 387 aa17.54■□□□□ 0.4
RPL28-204ENST00000431533 NID2Q14112 1375 aa17.53■□□□□ 0.4
RPL28-204ENST00000431533 PI4K2BG5E9Z4 385 aa17.53■□□□□ 0.4
RPL28-204ENST00000431533 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
RPL28-204ENST00000431533 NCK2O43639 380 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms