RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 GYPCP04921 128 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 GHRHRQ02643 423 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 GIT2Q14161 759 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PGM5Q15124 567 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 CATSPERGQ6ZRH7 1159 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 KRT26Q7Z3Y9 468 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 NELFCDQ8IXH7 590 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 MYOCDQ8IZQ8 938 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 CCDC112Q8NEF3 446 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 RMDN3Q96TC7 470 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 BAG1Q99933 345 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 TEKT3Q9BXF9 490 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PRDM4Q9UKN5 801 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 ZNF214Q9UL59 606 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 PTPRFP10586 1907 aa18.53■□□□□ 0.56
USHBP1-203ENST00000431146 RSPH10B2B2RC85 870 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 B4DLN1 442 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 RSPH10BP0C881 870 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 FXR1P51114 621 aaKnown RBP eCLIP18.52■□□□□ 0.56
USHBP1-203ENST00000431146 MAP3K9P80192 1104 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 PLS1Q14651 629 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 NOC3LQ8WTT2 800 aaKnown RBP18.52■□□□□ 0.56
USHBP1-203ENST00000431146 STK24Q9Y6E0 443 aa18.52■□□□□ 0.56
USHBP1-203ENST00000431146 RNF225M0QZC1 329 aaPredicted RBP18.52■□□□□ 0.55
USHBP1-203ENST00000431146 TNNT1P13805 278 aa18.52■□□□□ 0.55
USHBP1-203ENST00000431146 MTIF2P46199 727 aaKnown RBP18.52■□□□□ 0.55
USHBP1-203ENST00000431146 TREML2Q5T2D2 321 aa18.52■□□□□ 0.55
USHBP1-203ENST00000431146 BANK1Q8NDB2 785 aa18.52■□□□□ 0.55
USHBP1-203ENST00000431146 PXMP2Q9NR77 195 aa18.52■□□□□ 0.55
USHBP1-203ENST00000431146 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 EYA4O95677 639 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 FDX1P10109 184 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 CASP5P51878 434 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 ITGB3BPQ13352 177 aaPredicted RBP18.51■□□□□ 0.55
USHBP1-203ENST00000431146 MB21D1Q8N884 522 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 TUFT1Q9NNX1 390 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 ADAMTS5Q9UNA0 930 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
USHBP1-203ENST00000431146 FRMD3A2A2Y4 597 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 SPDYE16A6NNV3 312 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-203ENST00000431146 MTMR1Q13613 665 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 ARHGEF16Q5VV41 709 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 SFR1Q86XK3 245 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 ZNF507Q8TCN5 953 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 PPP1R13BQ96KQ4 1090 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 PDCD2LQ9BRP1 358 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 ITIH6Q6UXX5 1313 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 SFI1A8K8P3 1242 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 DHX15O43143 795 aaKnown RBP18.5■□□□□ 0.55
USHBP1-203ENST00000431146 PPP1R12BO60237 982 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-203ENST00000431146 MFAP3LO75121 409 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 B3GNT9Q6UX72 402 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 SCFD1Q8WVM8 642 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 ELP3Q9H9T3 547 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 AGO4Q9HCK5 861 aaKnown RBP18.5■□□□□ 0.55
USHBP1-203ENST00000431146 CSADQ9Y600 493 aa18.5■□□□□ 0.55
USHBP1-203ENST00000431146 PAPPA2Q9BXP8 1791 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 FRMPD4Q14CM0 1322 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
USHBP1-203ENST00000431146 BCRP11274 1271 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 FAM114A1Q8IWE2 563 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 RIT2Q99578 217 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 LXNQ9BS40 222 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
USHBP1-203ENST00000431146 JADE2Q9NQC1 790 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 MAP3K20Q9NYL2 800 aaKnown RBP18.49■□□□□ 0.55
USHBP1-203ENST00000431146 KLK7P49862 253 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 LRRC63Q05C16 580 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 MTF1Q14872 753 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 EPHA7Q15375 998 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 MIIPQ5JXC2 388 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 DPY19L2Q6NUT2 758 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 TSG101Q99816 390 aa18.49■□□□□ 0.55
USHBP1-203ENST00000431146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.49■□□□□ 0.55
USHBP1-203ENST00000431146 SOWAHDA6NJG2 315 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 ARHGAP6O43182 974 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 STX10O60499 249 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 ATP9AO75110 1047 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 ZCWPW2Q504Y3 356 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 TOGARAM2Q6ZUX3 1019 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 MIER3Q7Z3K6 550 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 OTUD5Q96G74 571 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 TEX13BQ9BXU2 312 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 KCND1Q9NSA2 647 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 SAMM50Q9Y512 469 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 KIAA1217Q5T5P2 1943 aa18.48■□□□□ 0.55
USHBP1-203ENST00000431146 TRAF5O00463 557 aa18.47■□□□□ 0.55
USHBP1-203ENST00000431146 IRF6O14896 467 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms