RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TTC38Q5R3I4 469 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 PCYT2Q99447 389 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 TMEM60Q9H2L4 133 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 NOL7Q9UMY1 257 aaKnown RBP28.43■■■□□ 2.14
CPNE1-212ENST00000430570 STX6O43752 255 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 GAS7O60861 476 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 F2P00734 622 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 TRAPPC10P48553 1259 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 PSEN2P49810 448 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 MLLT1Q03111 559 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-212ENST00000430570 BECN1Q14457 450 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 C1orf53Q5VUE5 145 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 SLC43A3Q8NBI5 491 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 TEKT3Q9BXF9 490 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 UNC45AQ9H3U1 944 aa28.42■■■□□ 2.14
CPNE1-212ENST00000430570 HAS3O00219 553 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 TBX3O15119 743 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 ZNF746Q6NUN9 644 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-212ENST00000430570 ABHD15Q6UXT9 468 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 DPF3Q92784 378 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 FAM20AQ96MK3 541 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 ATP11BQ9Y2G3 1177 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 PCDHB6Q9Y5E3 794 aa28.41■■■□□ 2.14
CPNE1-212ENST00000430570 NEMFO60524 1076 aa28.4■■■□□ 2.14
CPNE1-212ENST00000430570 KRT76Q01546 638 aa28.4■■■□□ 2.14
CPNE1-212ENST00000430570 MFSD10Q14728 455 aa28.4■■■□□ 2.14
CPNE1-212ENST00000430570 B3GNT9Q6UX72 402 aa28.4■■■□□ 2.14
CPNE1-212ENST00000430570 MTMR9Q96QG7 549 aa28.4■■■□□ 2.14
CPNE1-212ENST00000430570 H3BRB1 525 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 CHMP2AO43633 222 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 LGR5O75473 907 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 TLE2Q04725 743 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 RESTQ13127 1097 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 CALCRLQ16602 461 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 KIAA0753Q2KHM9 967 aa28.39■■■□□ 2.13
CPNE1-212ENST00000430570 TUT1Q9H6E5 874 aaKnown RBP28.39■■■□□ 2.13
CPNE1-212ENST00000430570 IGKV6D-21A0A0A0MT36 114 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 MARCH6O60337 910 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 SUPT20HL2P0C7V6 817 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 C4orf32Q8N8J7 132 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 KATNAL1Q9BW62 490 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 VAV3Q9UKW4 847 aa28.38■■■□□ 2.13
CPNE1-212ENST00000430570 PQBP1O60828 265 aaKnown RBP28.37■■■□□ 2.13
CPNE1-212ENST00000430570 BAG4O95429 457 aaKnown RBP28.37■■■□□ 2.13
CPNE1-212ENST00000430570 RILPL1Q5EBL4 403 aa28.37■■■□□ 2.13
CPNE1-212ENST00000430570 MIS18BP1Q6P0N0 1132 aa28.37■■■□□ 2.13
CPNE1-212ENST00000430570 CCDC60Q8IWA6 550 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-212ENST00000430570 SLFN12Q8IYM2 578 aa28.37■■■□□ 2.13
CPNE1-212ENST00000430570 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.37■■■□□ 2.13
CPNE1-212ENST00000430570 EMSYQ7Z589 1322 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 EML1O00423 815 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 EVI5O60447 810 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 ORC2Q13416 577 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-212ENST00000430570 FAM47CQ5HY64 1035 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 SWSAP1Q6NVH7 229 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 NFRKBQ6P4R8 1299 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 ANKRD33Q7Z3H0 272 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 BRAPQ7Z569 592 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 FAM126BQ8IXS8 530 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 SMAP1Q8IYB5 467 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-212ENST00000430570 C7orf61Q8IZ16 206 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 GLG1Q92896 1179 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 RNPEPQ9H4A4 650 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 SMARCAD1Q9H4L7 1026 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 DISC1Q9NRI5 854 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 HDAC6Q9UBN7 1215 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 TCEAL9Q9UHQ7 104 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 PCDHA10Q9Y5I2 948 aa28.36■■■□□ 2.13
CPNE1-212ENST00000430570 WDR64B1ANS9 1081 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 MARK3P27448 753 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 TXKP42681 527 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 STAT5BP51692 787 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 PKP1Q13835 747 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 FAM173BQ6P4H8 233 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 PCDH10Q9P2E7 1040 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 SAMM50Q9Y512 469 aa28.35■■■□□ 2.13
CPNE1-212ENST00000430570 BACH1O14867 736 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 SPIRE1Q08AE8 756 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 PPP2R5CQ13362 524 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 HIC1Q14526 733 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 FOXD4L5Q5VV16 416 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-212ENST00000430570 PLPPR4Q7Z2D5 763 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 MIER3Q7Z3K6 550 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 FOXD4L4Q8WXT5 416 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-212ENST00000430570 TOX2Q96NM4 488 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 TRPV6Q9H1D0 765 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 AZI2Q9H6S1 392 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 ZNF302Q9NR11 478 aa28.34■■■□□ 2.13
CPNE1-212ENST00000430570 ZNF215Q9UL58 517 aaPredicted RBP28.34■■■□□ 2.13
CPNE1-212ENST00000430570 B4GALT4O60513 344 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 CD4P01730 458 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 PSAPP07602 524 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 JAK3P52333 1124 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 FAAP100Q0VG06 881 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 PTGDRQ13258 359 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 SESTD1Q86VW0 696 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 C7orf31Q8N865 590 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 AFAP1L1Q8TED9 768 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 SEZ6LQ9BYH1 1024 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 TTC12Q9H892 705 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms