RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 RRN3P2A6NIE6 340 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 STXBP3O00186 592 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
HDAC9-211ENST00000430454 SCG2P13521 617 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 ITGB5P18084 799 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 IGFBP4P22692 258 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 SLC26A2P50443 739 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 RABGGTBP53611 331 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 ARHGAP4P98171 946 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 PPFIA1Q13136 1202 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 PFKFB3Q16875 520 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-211ENST00000430454 ZNF618Q5T7W0 954 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 NIPA1Q7RTP0 329 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 SKAP1Q86WV1 359 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 REXO1Q8N1G1 1221 aaKnown RBP10.41□□□□□ -0.74
HDAC9-211ENST00000430454 IL27Q8NEV9 243 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 RAD9AQ99638 391 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 ANO3Q9BYT9 981 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 PRDM12Q9H4Q4 367 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 SLC9A2Q9UBY0 812 aa10.41□□□□□ -0.74
HDAC9-211ENST00000430454 NFASCO94856 1347 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 M0QZ92 97 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 CPLX1O14810 134 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 CA3P07451 260 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 KCNA2P16389 499 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 SREBF1P36956 1147 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 WDR5P61964 334 aaKnown RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 APOBRQ0VD83 1088 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 FUT2Q10981 343 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 SEMA3FQ13275 785 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 TRIM71Q2Q1W2 868 aaKnown RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 RUFY3Q7L099 469 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 FAM177A1Q8N128 213 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 CTAGE1Q96RT6 745 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 RNF26Q9BY78 433 aaPredicted RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 C22orf23Q9BZE7 217 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 TM6SF1Q9BZW5 370 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 RNPEPQ9H4A4 650 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 KCNH7Q9NS40 1196 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 SETD4Q9NVD3 440 aa10.4□□□□□ -0.74
HDAC9-211ENST00000430454 YBX2Q9Y2T7 364 aaKnown RBP10.4□□□□□ -0.74
HDAC9-211ENST00000430454 MYH7BA7E2Y1 1941 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 MEIS1O00470 390 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 TREHO43280 583 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 NBNO60934 754 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 ATP9AO75110 1047 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 CDKL5O76039 1030 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 CENPBP07199 599 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-211ENST00000430454 HOXC8P31273 242 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
HDAC9-211ENST00000430454 ZNF200P98182 395 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-211ENST00000430454 AAK1Q2M2I8 961 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 IER5Q5VY09 327 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 PLPPR4Q7Z2D5 763 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 RPAINQ86UA6 219 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 ZMYND12Q9H0C1 365 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 SH3GLB2Q9NR46 395 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 TBC1D22BQ9NU19 505 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 RNF216Q9NWF9 866 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-211ENST00000430454 PKD2L1Q9P0L9 805 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 NID2Q14112 1375 aa10.39□□□□□ -0.75
HDAC9-211ENST00000430454 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 BACH1O14867 736 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 GJB5O95377 273 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 CYP3A4P08684 503 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 IFNAR1P17181 557 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 CDC27P30260 824 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 STAT5BP51692 787 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 EVCP57679 992 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 SSRP1Q08945 709 aaKnown RBP10.38□□□□□ -0.75
HDAC9-211ENST00000430454 GRIK4Q16099 956 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 PLEKHG4Q58EX7 1191 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 JAKMIP3Q5VZ66 844 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 GALNT17Q6IS24 598 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 MIS18BP1Q6P0N0 1132 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 PLA2G4DQ86XP0 818 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 NME8Q8N427 588 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 USP38Q8NB14 1042 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 LMBR1Q8WVP7 490 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
HDAC9-211ENST00000430454 VWCEQ96DN2 955 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 SAMD11Q96NU1 681 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 SLC26A6Q9BXS9 759 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 AGXT2Q9BYV1 514 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 AGO4Q9HCK5 861 aaKnown RBP10.38□□□□□ -0.75
HDAC9-211ENST00000430454 TUBE1Q9UJT0 475 aa10.38□□□□□ -0.75
HDAC9-211ENST00000430454 DEXIO95424 95 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms