RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 PRMT1Q99873 361 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKRD33BA6NCL7 494 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 SNUPNO95149 360 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 KIF4AO95239 1232 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 GSTA1P08263 222 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 NCALDP61601 193 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ZNF268Q14587 947 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 PPP2R5BQ15173 497 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 SFMBT2Q5VUG0 894 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 PIGWQ7Z7B1 504 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 CABP7Q86V35 215 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 TRIM51Q9BSJ1 452 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 KRIT1O00522 736 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 EVI5O60447 810 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 RAPGEF1Q13905 1077 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKS1AQ92625 1134 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ECT2Q9H8V3 914 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 NOC2LQ9Y3T9 749 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 STRCP1A6NGW2 1772 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 A0A0G2JS52 829 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 FAM170AA1A519 330 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 RBAK-RBAKDNI3L0D1 243 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 KRT16P08779 473 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 RARAP10276 462 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 IFI35P80217 286 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 LRRC41Q15345 812 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CCHCR1Q8TD31 782 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■■■■ 46.7
SEMA4D-209ENST00000429836 IQCDQ96DY2 449 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 ADAM7Q9H2U9 754 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CNOT10Q9H9A5 744 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CFAP73A6NFT4 308 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 NOL4O94818 638 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 SERPING1P05155 500 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 DYMQ7RTS9 669 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 FAM133AQ8N9E0 248 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 FLT1P17948 1338 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 AFF2P51816 1311 aa12.11□□□□□ -0.47
SEMA4D-209ENST00000429836 CCDC194A0A1B0GVG4 234 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ASAP2O43150 1006 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 MYL1P05976 194 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 GNAT2P19087 354 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 CYP7A1P22680 504 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 RWDD2BP57060 319 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 BLMHQ13867 455 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ITIH4Q14624 930 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 CCSER1Q9C0I3 900 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 PGRMC1O00264 195 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 ALADP13716 330 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 BCAMP50895 628 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 SLC18A3Q16572 532 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
SEMA4D-209ENST00000429836 PNPLA7Q6ZV29 1317 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 MAP3K13O43283 966 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 COPB2P35606 906 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 RAB27AP51159 221 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CNNM4Q6P4Q7 775 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 ADAT2Q7Z6V5 191 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CENPTQ96BT3 561 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 C7orf25Q9BPX7 421 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 HOMER3Q9NSC5 361 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms