RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CUL1Q13616 776 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 KCTD6Q8NC69 237 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 USP6P35125 1406 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 CLRN2A0PK11 232 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 USP17L3A6NCW0 530 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 USP17L4A6NCW7 530 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 CHEK2O96017 543 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 USP17L1Q7RTZ2 530 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 TRMT2AQ8IZ69 625 aaKnown RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 CNPY4Q8N129 248 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 TACO1Q9BSH4 297 aaKnown RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 FAM96AQ9H5X1 160 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 EPB41L5Q9HCM4 733 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 ASNSP08243 561 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 INPP1P49441 399 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 ADCK5Q3MIX3 580 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 NEK9Q8TD19 979 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 QTRT2Q9H974 415 aaKnown RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 IQANK1A0A1B0GTG1 560 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 TNFAIP2Q03169 654 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 KLC3Q6P597 504 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 VPS39Q96JC1 886 aa13.8□□□□□ -0.2
LDB3-205ENST00000429277 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
LDB3-205ENST00000429277 SMIM24O75264 130 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PDXDC2PQ6P474 469 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PDIK1LQ8N165 341 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PRPF38AQ8NAV1 312 aaKnown RBP13.79□□□□□ -0.2
LDB3-205ENST00000429277 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 SERPINI1Q99574 410 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 MIF4GDA9UHW6 222 aaKnown RBP13.79□□□□□ -0.2
LDB3-205ENST00000429277 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 VSTM4Q8IW00 320 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
LDB3-205ENST00000429277 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 FGFR1OP2Q9NVK5 253 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 SORBS3O60504 671 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
LDB3-205ENST00000429277 DPCR1Q3MIW9 517 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 ERFEQ4G0M1 354 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 TTC39CQ8N584 583 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 TTC13Q8NBP0 860 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 NDST4Q9H3R1 872 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 GNAT1P11488 350 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PLTPP55058 493 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 CENPUQ71F23 418 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PROM2Q8N271 834 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 UHMK1Q8TAS1 419 aaKnown RBP13.79□□□□□ -0.2
LDB3-205ENST00000429277 FBXO41Q8TF61 875 aa13.79□□□□□ -0.2
LDB3-205ENST00000429277 PODXLO00592 558 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 ESRRGP62508 458 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 RYBPQ8N488 228 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 MCUQ8NE86 351 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 PLEKHG2Q9H7P9 1386 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 CLTAP09496 248 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 RWDD2BP57060 319 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 TMTC4Q5T4D3 741 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 FAM133AQ8N9E0 248 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 K7ERI5 159 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 GFPT2O94808 682 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 PAMP19021 973 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 PHEXP78562 749 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 ACTR5Q9H9F9 607 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 NHEJ1Q9H9Q4 299 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 PACSIN2Q9UNF0 486 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 TTC37Q6PGP7 1564 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 GNGT2O14610 69 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 TCP11X2Q5H9J9 407 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 SPDL1Q96EA4 605 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 CALN1Q9BXU9 219 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
LDB3-205ENST00000429277 ERBB3P21860 1342 aa13.78□□□□□ -0.2
LDB3-205ENST00000429277 LRRD1A4D1F6 860 aa13.77□□□□□ -0.2
LDB3-205ENST00000429277 LRRN2O75325 713 aa13.77□□□□□ -0.2
LDB3-205ENST00000429277 ZBED1O96006 694 aa13.77□□□□□ -0.2
LDB3-205ENST00000429277 PLCG1P19174 1290 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms