RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 MMP3P08254 477 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 PPTC7Q8NI37 304 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
PABPC1P11-201ENST00000428966 KIAA1217Q5T5P2 1943 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 MEIS1O00470 390 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 CYP3A4P08684 503 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 ARP10275 920 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 KCNA2P16389 499 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 XBP1P17861 261 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 FOSBP53539 338 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 RTP1P59025 263 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 PSMC6P62333 389 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 TRIM60Q495X7 471 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 PKD2L1Q9P0L9 805 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
PABPC1P11-201ENST00000428966 UQCRHLA0A096LP55 91 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 ZEB2O60315 1214 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 UQCRHP07919 91 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 MYL3P08590 195 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 NR5A1Q13285 461 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 NEDD9Q14511 834 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 VTI1AQ96AJ9 217 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 CDHR1Q96JP9 859 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 MLXIPQ9HAP2 919 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 MAFGO15525 162 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 HOXD8P13378 290 aaPredicted RBP13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 KRT40Q6A162 431 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
PABPC1P11-201ENST00000428966 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 CABYRO75952 493 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 MMP1P03956 469 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 CIITAP33076 1130 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ZNF76P36508 570 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 CDK7P50613 346 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 SP4Q02446 784 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 TLE2Q04725 743 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 DGKDQ16760 1214 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 SLC43A3Q8NBI5 491 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 KAT2BQ92831 832 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 LENG9Q96B70 501 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 A0A0U1RQG5 324 aaPredicted RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 GOLGA6L6A8MZA4 724 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 H0YGN5 161 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ARVCFO00192 962 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 NUBP1P53384 320 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 INF2Q27J81 1249 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 GPR20Q99678 358 aa13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
PABPC1P11-201ENST00000428966 PPFIA4O75335 1185 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 SYN1P17600 705 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 USP11P51784 963 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 PRR16Q569H4 304 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 KRT25Q7Z3Z0 450 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 PRIMPOLQ96LW4 560 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 NR2E3Q9Y5X4 410 aa13.11□□□□□ -0.31
PABPC1P11-201ENST00000428966 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 NOP56O00567 594 aaKnown RBP13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 KPNA6O60684 536 aa13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 TDP2O95551 362 aa13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 F2P00734 622 aa13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 KRT2P35908 639 aa13.1□□□□□ -0.31
PABPC1P11-201ENST00000428966 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms