RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 ORC3Q9UBD5 711 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-210ENST00000428861 NFASCO94856 1347 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 DDX39AO00148 427 aaKnown RBP12.23□□□□□ -0.45
ATG4B-210ENST00000428861 SMIM10L2AP0DMW4 78 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 SMIM10L2BP0DMW5 78 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 TRIM71Q2Q1W2 868 aaKnown RBP12.23□□□□□ -0.45
ATG4B-210ENST00000428861 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
ATG4B-210ENST00000428861 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 ZNF365Q70YC5 407 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 NIPA1Q7RTP0 329 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 GIMAP8Q8ND71 665 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-210ENST00000428861 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 SEPT1Q8WYJ6 367 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 GJA10Q969M2 543 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 GTF3C3Q9Y5Q9 886 aa12.23□□□□□ -0.45
ATG4B-210ENST00000428861 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 TREHO43280 583 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 LGR5O75473 907 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
ATG4B-210ENST00000428861 TDP2O95551 362 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 IQCF3P0C7M6 154 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 MARK3P27448 753 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 FOSBP53539 338 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 ACTR2P61160 394 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 ADAM17P78536 824 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 PPIGQ13427 754 aaKnown RBP eCLIP12.22□□□□□ -0.454e-8■■□□□ 13.5
ATG4B-210ENST00000428861 PRR16Q569H4 304 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 RASIP1Q5U651 963 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 FAM109BQ6ICB4 259 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-210ENST00000428861 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 SETD4Q9NVD3 440 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-210ENST00000428861 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
ATG4B-210ENST00000428861 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-210ENST00000428861 C17orf102A2RUQ5 167 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 IPO5O00410 1097 aaKnown RBP12.21□□□□□ -0.45
ATG4B-210ENST00000428861 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 MSH4O15457 936 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 ATG7O95352 703 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 SLC34A2O95436 690 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 CKBP12277 381 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 USP11P51784 963 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 NR5A1Q13285 461 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 INF2Q27J81 1249 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 TCTN1Q2MV58 587 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 MCTP2Q6DN12 878 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 ABHD15Q6UXT9 468 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 DEFB128Q7Z7B8 93 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 ZBTB10Q96DT7 871 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
ATG4B-210ENST00000428861 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 OSBPL7Q9BZF2 842 aa12.21□□□□□ -0.45
ATG4B-210ENST00000428861 SCN5AQ14524 2016 aa12.21□□□□□ -0.46
ATG4B-210ENST00000428861 EMSYQ7Z589 1322 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 CYP3A7-CYP3A51PA0A087WV96 503 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 CYP3A7P24462 503 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 RBL2Q08999 1139 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 PTK7Q13308 1070 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 GALNT17Q6IS24 598 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 Q7L0L9 218 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 OTOP2Q7RTS6 562 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 SERINC5Q86VE9 423 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 CCDC60Q8IWA6 550 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-210ENST00000428861 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-210ENST00000428861 CAGE1Q8TC20 777 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 ATP6V0A1Q93050 837 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 MBOAT7Q96N66 472 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 TET1Q8NFU7 2136 aa12.2□□□□□ -0.46
ATG4B-210ENST00000428861 CDH23Q9H251 3354 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 WNT7AO00755 349 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 SLC37A4O43826 429 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 NBNO60934 754 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 SELPP16109 830 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 ATP4AP20648 1035 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
ATG4B-210ENST00000428861 BFSP2Q13515 415 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 RABEP1Q15276 862 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 Q4G0T1 1027 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 MARCH8Q5T0T0 291 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 ZNF618Q5T7W0 954 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 PSRC1Q6PGN9 363 aaPredicted RBP12.19□□□□□ -0.46
ATG4B-210ENST00000428861 RUFY4Q6ZNE9 571 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 HERVK_113Q902F9 699 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 GLG1Q92896 1179 aa12.19□□□□□ -0.46
ATG4B-210ENST00000428861 SLC5A5Q92911 643 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms