RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 A0A1W2PQ27 194 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 A0A1W2PQ64 194 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 A0A1W2PQD8 194 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 KINO60870 393 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 SLITRK3O94933 977 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TXNP10599 105 aaKnown RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 EDNRBP24530 442 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 NPEPPSP55786 919 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCDC144BQ3MJ40 725 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 MAMDC4Q6UXC1 1216 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCDC60Q8IWA6 550 aaPredicted RBP10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 FERMT2Q96AC1 680 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TINF2Q9BSI4 451 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 FGFBP2Q9BYJ0 223 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 NUP62CLQ9H1M0 184 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 DISC1Q9NRI5 854 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
HMGCLL1-206ENST00000428842 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 GPR25O00155 361 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 EIF3JO75822 258 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 ZNF286BP0CG31 522 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 BMP6P22004 513 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 CNGA1P29973 690 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 MAPK4P31152 587 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 STAT6P42226 847 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 BEX3Q00994 111 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRAF1Q13077 416 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 ARL6IP4Q66PJ3 421 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 OLFML2BQ68BL8 750 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 KRBA2Q6ZNG9 492 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 DNAJC5GQ8N7S2 189 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 SH3TC2Q8TF17 1288 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 KATNBL1Q9H079 304 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 RSPH10B2B2RC85 870 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 ZNF862O60290 1169 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 RSPH10BP0C881 870 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 GCFC2P16383 781 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 SMPD1P17405 629 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 LONP1P36776 959 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 MAP2K5Q13163 448 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 DNERQ8NFT8 737 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 PAGE5Q96GU1 130 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 LXNQ9BS40 222 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 PCDHA5Q9Y5H7 936 aa10.68□□□□□ -0.7
HMGCLL1-206ENST00000428842 MYADML2A6NDP7 307 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 ACTR2P61160 394 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 TMEM266Q2M3C6 531 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 NLRX1Q86UT6 975 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 SHCBP1Q8NEM2 672 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 BHMT2Q9H2M3 363 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 CLSTN2Q9H4D0 955 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 USP20Q9Y2K6 914 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 CHD7Q9P2D1 2997 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 MYH9P35579 1960 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 FARP2O94887 1054 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 MBD3O95983 291 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 ATP4AP20648 1035 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 CCND3P30281 292 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 PRPHP41219 470 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 CSPP1Q1MSJ5 1256 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 KRT79Q5XKE5 535 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 C11orf57Q6ZUT1 292 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 MIER3Q7Z3K6 550 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 PPP1R16BQ96T49 567 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 TEKT3Q9BXF9 490 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 JPH1Q9HDC5 661 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 GABBR1Q9UBS5 961 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 REV3LO60673 3130 aa10.67□□□□□ -0.7
HMGCLL1-206ENST00000428842 MYMKA6NI61 221 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 STRNO43815 780 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 PGK1P00558 417 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 ACVR2BQ13705 512 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 PTPN21Q16825 1174 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 LRSAM1Q6UWE0 723 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 B3GNT9Q6UX72 402 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 KSR1Q8IVT5 923 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 AFG1LQ8WV93 481 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 USP6NLQ92738 828 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 PCYT2Q99447 389 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 HSD17B14Q9BPX1 270 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 RUSC1Q9BVN2 902 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 RBSNQ9H1K0 784 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 EHMT1Q9H9B1 1298 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 MLXIPQ9HAP2 919 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
HMGCLL1-206ENST00000428842 C5orf42Q9H799 3197 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms