RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MEIS2O14770 477 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 POLR2MP0CAP2 368 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 CCNA1P78396 465 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 KCNV1Q6PIU1 500 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 PIK3AP1Q6ZUJ8 805 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 ANKRD35Q8N283 1001 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
CECR3-201ENST00000428828 MIEF2Q96C03 454 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 MORF4L1Q9UBU8 362 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 RCOR1Q9UKL0 485 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 PCDHA6Q9UN73 950 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 PCDHA8Q9Y5H6 950 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 KIAA1217Q5T5P2 1943 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 SLC25A27O95847 323 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 BCRP11274 1271 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 RESTQ13127 1097 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 EARS2Q5JPH6 523 aaKnown RBP12.68□□□□□ -0.38
CECR3-201ENST00000428828 GALNT17Q6IS24 598 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 RNF207Q6ZRF8 634 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 KAT2BQ92831 832 aa12.68□□□□□ -0.38
CECR3-201ENST00000428828 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
CECR3-201ENST00000428828 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
CECR3-201ENST00000428828 CCDC194A0A1B0GVG4 234 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 IKBKBO14920 756 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 CBFA2T2O43439 604 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 RPS6P62753 249 aaKnown RBP12.67□□□□□ -0.38
CECR3-201ENST00000428828 UBXN2AP68543 259 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 FAM160A1Q05DH4 1040 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
CECR3-201ENST00000428828 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
CECR3-201ENST00000428828 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 GIMAP7Q8NHV1 300 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 SGSM3Q96HU1 749 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
CECR3-201ENST00000428828 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 LRRC37A2A6NM11 1700 aa12.67□□□□□ -0.38
CECR3-201ENST00000428828 SPDYE3A6NKU9 549 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 M0R2N6 131 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 KINO60870 393 aaKnown RBP12.66□□□□□ -0.38
CECR3-201ENST00000428828 ELF1P32519 619 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
CECR3-201ENST00000428828 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 FAM177A1Q8N128 213 aaPredicted RBP12.66□□□□□ -0.38
CECR3-201ENST00000428828 MMP19Q99542 508 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 ANO3Q9BYT9 981 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 GLT8D2Q9H1C3 349 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 MROH8Q9H579 483 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 ANKRD33BA6NCL7 494 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 A6NNZ2 444 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CHUKO15111 745 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 PGK2P07205 417 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 COPB2P35606 906 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 HSD17B4P51659 736 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 KCTD2Q14681 263 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CRYMQ14894 314 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 INF2Q27J81 1249 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 TUBB8Q3ZCM7 444 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CABS1Q96KC9 395 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 ANKZF1Q9H8Y5 726 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 CYP39A1Q9NYL5 469 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 IVNS1ABPQ9Y6Y0 642 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 DOCK5Q9H7D0 1870 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 ZNF236Q9UL36 1845 aa12.66□□□□□ -0.38
CECR3-201ENST00000428828 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 CUTAO60888 179 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 FCER1AP12319 257 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
CECR3-201ENST00000428828 ZKSCAN8Q15776 578 aaPredicted RBP12.65□□□□□ -0.38
CECR3-201ENST00000428828 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
CECR3-201ENST00000428828 KRT25Q7Z3Z0 450 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 SHCBP1Q8NEM2 672 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 SYTL5Q8TDW5 730 aaPredicted RBP12.65□□□□□ -0.38
CECR3-201ENST00000428828 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 IFNKQ9P0W0 207 aa12.65□□□□□ -0.38
CECR3-201ENST00000428828 PFASO15067 1338 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 EBAG9O00559 213 aa12.64□□□□□ -0.39
CECR3-201ENST00000428828 GCFC2P16383 781 aaKnown RBP12.64□□□□□ -0.39
CECR3-201ENST00000428828 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms