RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZNF174Q15697 407 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 TSNAXIP1Q2TAA8 658 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 EARS2Q5JPH6 523 aaKnown RBP17.56■□□□□ 0.4
C9orf3-206ENST00000428313 IRGCQ6NXR0 463 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 TMEM154Q6P9G4 183 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 CROCCP2Q86T23 111 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 DDX42Q86XP3 938 aaKnown RBP eCLIP17.56■□□□□ 0.4
C9orf3-206ENST00000428313 NBPF15Q8N660 670 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 SELENOSQ9BQE4 189 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
C9orf3-206ENST00000428313 KLRC4O43908 158 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-206ENST00000428313 ALX1Q15699 326 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
C9orf3-206ENST00000428313 MIPOL1Q8TD10 442 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 P2RX5Q93086 422 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 TRIM7Q9C029 511 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 ZWILCHQ9H900 591 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 A0A1B0GVG6 124 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 LRRC53A6NM62 1247 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 UPP2O95045 317 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 GJB6O95452 261 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 DIXDC1Q155Q3 683 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 OR52E8Q6IFG1 317 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-206ENST00000428313 KIF2BQ8N4N8 673 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 CFAP61Q8NHU2 1237 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 RXFP1Q9HBX9 757 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
C9orf3-206ENST00000428313 CCDC169A6NNP5 214 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 WNT7AO00755 349 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 MYL6BP14649 208 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 LONP1P36776 959 aaKnown RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 STAT6P42226 847 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 PEX5P50542 639 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 EHHADHQ08426 723 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 PARP6Q2NL67 630 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 PDXDC1Q6P996 788 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 TNFRSF25Q93038 417 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 FGD4Q96M96 766 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 RPS6KC1Q96S38 1066 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 PRMT1Q99873 361 aaKnown RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 AGTP01019 485 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 TRAPPC10P48553 1259 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 DZIP3Q86Y13 1208 aaKnown RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 TMTC2Q8N394 836 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 ENDOVQ8N8Q3 282 aaKnown RBP17.54■□□□□ 0.4
C9orf3-206ENST00000428313 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 STK32AQ8WU08 396 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 BAP1Q92560 729 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 BLOC1S6Q9UL45 172 aa17.54■□□□□ 0.4
C9orf3-206ENST00000428313 ZPR1O75312 459 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 PENKP01210 267 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-206ENST00000428313 ADD2P35612 726 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 RRAGAQ7L523 313 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 CYP39A1Q9NYL5 469 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 ARL2BPQ9Y2Y0 163 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 ABCB11O95342 1321 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 PNPLA7Q6ZV29 1317 aa17.53■□□□□ 0.4
C9orf3-206ENST00000428313 EIF4E1BA6NMX2 242 aaKnown RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 EPHB6O15197 1021 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 DAPK3O43293 454 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 PDHA1P08559 390 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 ZAP70P43403 619 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 RAD23BP54727 409 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 WTAPQ15007 396 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 RPS6KA1Q15418 735 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 VWA3BQ502W6 1294 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 ARL6IP4Q66PJ3 421 aaKnown RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 HGSNATQ68CP4 663 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 FANCBQ8NB91 859 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 FAM192AQ9GZU8 254 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 LRRC4CQ9HCJ2 640 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 NKX1-2Q9UD57 310 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 RGPD2P0DJD1 1756 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 PEX11AO75192 247 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 TPBGLP0DKB5 382 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 DNA2P51530 1060 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 POLE2P56282 527 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 RNASE9P60153 205 aaKnown RBP17.52■□□□□ 0.4
C9orf3-206ENST00000428313 CCDC15Q0P6D6 951 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 USP4Q13107 963 aa17.52■□□□□ 0.4
C9orf3-206ENST00000428313 PABPC1LQ4VXU2 614 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms