RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 KANK3Q6NY19 840 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 SHC4Q6S5L8 630 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 NLRX1Q86UT6 975 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 PLA2G4DQ86XP0 818 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 ELOA2Q8IYF1 753 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 CDHR1Q96JP9 859 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 CLIC6Q96NY7 704 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 CCSER1Q9C0I3 900 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 CSRNP2Q9H175 543 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 TMEM60Q9H2L4 133 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 KCNMB3Q9NPA1 279 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 JADE2Q9NQC1 790 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 PRDM5Q9NQX1 630 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 SLC5A4Q9NY91 659 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 COL20A1Q9P218 1284 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 HOOK1Q9UJC3 728 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 KCNH3Q9ULD8 1083 aa9.3□□□□□ -0.92
SMARCAL1-206ENST00000427645 ZNFX1Q9P2E3 1918 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 IGLV3-22A0A075B6J6 115 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 A0A1B0GVL5 298 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 STK25O00506 426 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SLC37A4O43826 429 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 KINO60870 393 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 ZNF202O95125 648 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 IGHA2P01877 340 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 MYCLP12524 364 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 EIF2AK2P19525 551 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 ADCYAP1R1P41586 468 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SHHQ15465 462 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 GNPTABQ3T906 1256 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 C9orf50Q5SZB4 431 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SLC30A10Q6XR72 485 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SLC39A5Q6ZMH5 540 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 IGSF22Q8N9C0 903 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 ENGASEQ8NFI3 743 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 ERMNQ8TAM6 284 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 BADQ92934 168 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 GPRASP2Q96D09 838 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 RIT2Q99578 217 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 SDF4Q9BRK5 362 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 TBC1D22BQ9NU19 505 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 DACT1Q9NYF0 836 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 LRWD1Q9UFC0 647 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 DIS3Q9Y2L1 958 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 UBIAD1Q9Y5Z9 338 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
SMARCAL1-206ENST00000427645 DNAJC25-GNG10A0A024R161 153 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 ASB14A6NK59 587 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 HAX1O00165 279 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 MSH4O15457 936 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 NR1I2O75469 434 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 PGK2P07205 417 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 TGFB3P10600 412 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 PFKFB1P16118 471 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 LIG1P18858 919 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 NDUFA8P51970 172 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 MRPS9P82933 396 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 SNW1Q13573 536 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 MTMR1Q13613 665 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 IL17AQ16552 155 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 TRIM60Q495X7 471 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 KRT79Q5XKE5 535 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 KCNV1Q6PIU1 500 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 ETNPPLQ8TBG4 499 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 HAS1Q92839 578 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 SLC5A5Q92911 643 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 LENG9Q96B70 501 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 CALML4Q96GE6 196 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 NUP62CLQ9H1M0 184 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 TNMDQ9H2S6 317 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
SMARCAL1-206ENST00000427645 TRIM43BA6NCK2 446 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 KBTBD13C9JR72 458 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 IPO5O00410 1097 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 POLR2DO15514 142 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 MSCO60682 206 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 ITGB5P18084 799 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 MUTP22033 750 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 ITGB8P26012 769 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 ALDH5A1P51649 535 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 GRIN1Q05586 938 aa9.27□□□□□ -0.93
SMARCAL1-206ENST00000427645 PDE4DQ08499 809 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms