RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 GLT8D2Q9H1C3 349 aa21.89■■□□□ 1.09
COL9A2-204ENST00000427563 TPCN1Q9ULQ1 816 aa21.89■■□□□ 1.09
COL9A2-204ENST00000427563 KAT6AQ92794 2004 aa21.89■■□□□ 1.09
COL9A2-204ENST00000427563 IGLV3-22A0A075B6J6 115 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 MAFGO15525 162 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 TREHO43280 583 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 NBNO60934 754 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 PFKMP08237 780 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 SELPP16109 830 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 RFC2P35250 354 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 ANAPC15P60006 121 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 ADAM17P78536 824 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 ZNF618Q5T7W0 954 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 LRRC8DQ7L1W4 858 aa21.88■■□□□ 1.09
COL9A2-204ENST00000427563 AGO4Q9HCK5 861 aaKnown RBP21.88■■□□□ 1.09
COL9A2-204ENST00000427563 SIP14410 1827 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 C17orf102A2RUQ5 167 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 CYP3A4P08684 503 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 SCRN1Q12765 414 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 SEPT1Q8WYJ6 367 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 OSBPL7Q9BZF2 842 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 C6orf50Q9HD87 102 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 SETD4Q9NVD3 440 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 STXBP5LQ9Y2K9 1186 aa21.87■■□□□ 1.09
COL9A2-204ENST00000427563 YBX2Q9Y2T7 364 aaKnown RBP21.87■■□□□ 1.09
COL9A2-204ENST00000427563 NFASCO94856 1347 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 CXCL10P02778 98 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 NPY5RQ15761 445 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 REXO1Q8N1G1 1221 aaKnown RBP21.86■■□□□ 1.09
COL9A2-204ENST00000427563 CCDC155Q8N6L0 562 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 ATP6V0A1Q93050 837 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 UIMC1Q96RL1 719 aa21.86■■□□□ 1.09
COL9A2-204ENST00000427563 JPH1Q9HDC5 661 aaPredicted RBP21.86■■□□□ 1.09
COL9A2-204ENST00000427563 CHD7Q9P2D1 2997 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 WDR81Q562E7 1941 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 DHX15O43143 795 aaKnown RBP21.85■■□□□ 1.09
COL9A2-204ENST00000427563 LGR5O75473 907 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 LARGE1O95461 756 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 RABGGTBP53611 331 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 AK2P54819 239 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 AKAP17AQ02040 695 aaKnown RBP21.85■■□□□ 1.09
COL9A2-204ENST00000427563 SSRP1Q08945 709 aaKnown RBP21.85■■□□□ 1.09
COL9A2-204ENST00000427563 NIPA1Q7RTP0 329 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 CCDC12Q8WUD4 166 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-204ENST00000427563 LMBR1Q8WVP7 490 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 TIFAQ96CG3 184 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 CDX2Q99626 313 aaPredicted RBP21.85■■□□□ 1.09
COL9A2-204ENST00000427563 SLC9A2Q9UBY0 812 aa21.85■■□□□ 1.09
COL9A2-204ENST00000427563 EMSYQ7Z589 1322 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 TMEM265A0A087WTH1 108 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 ZBBXA8MT70 800 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 M0R2N6 131 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 CTDNEP1O95476 244 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 CCNE2O96020 404 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 MYOGP15173 224 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 MARK3P27448 753 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 GNA11P29992 359 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 ACTR2P61160 394 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 LENG9Q96B70 501 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 SH3GLB2Q9NR46 395 aa21.84■■□□□ 1.09
COL9A2-204ENST00000427563 ZNF215Q9UL58 517 aaPredicted RBP21.84■■□□□ 1.09
COL9A2-204ENST00000427563 PFKFB2O60825 505 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 ATG7O95352 703 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 GRIN2CQ14957 1233 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 PLA2G4DQ86XP0 818 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 CCDC148Q8NFR7 591 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 MYLIPQ8WY64 445 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 FTOQ9C0B1 505 aaKnown RBP eCLIP21.83■■□□□ 1.09
COL9A2-204ENST00000427563 MTIF3Q9H2K0 278 aaKnown RBP21.83■■□□□ 1.09
COL9A2-204ENST00000427563 SLC4A7Q9Y6M7 1214 aa21.83■■□□□ 1.09
COL9A2-204ENST00000427563 MICAL3Q7RTP6 2002 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 DEXIO95424 95 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 CIITAP33076 1130 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 THPOP40225 353 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 C8orf34Q49A92 452 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 MARCH8Q5T0T0 291 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 RUFY4Q6ZNE9 571 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 TRIM22Q8IYM9 498 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 ZBTB10Q96DT7 871 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 NKX2-4Q9H2Z4 354 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 ZNF576Q9H609 170 aa21.82■■□□□ 1.08
COL9A2-204ENST00000427563 IGKV6D-21A0A0A0MT36 114 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 DDX39AO00148 427 aaKnown RBP21.81■■□□□ 1.08
COL9A2-204ENST00000427563 CPLX1O14810 134 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 ATP2A2P16615 1042 aaKnown RBP21.81■■□□□ 1.08
COL9A2-204ENST00000427563 ZNF76P36508 570 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 NLRP5P59047 1200 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 MCTP2Q6DN12 878 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 SDF4Q9BRK5 362 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 SMARCAD1Q9H4L7 1026 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 ERAP1Q9NZ08 941 aa21.81■■□□□ 1.08
COL9A2-204ENST00000427563 NRCAMQ92823 1304 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 MYO9BQ13459 2157 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 ARHGEF15O94989 841 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 ST3GAL1Q11201 340 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 MKRN4PQ13434 485 aaPredicted RBP21.8■■□□□ 1.08
COL9A2-204ENST00000427563 ME3Q16798 604 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 CNKSR3Q6P9H4 555 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 ABHD15Q6UXT9 468 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 BICD2Q8TD16 824 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms