RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	IGKV6D-21	A0A0A0MT36	114 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	POTEM	A6NI47	508 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	FOXN1	O15353	648 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	GGPS1	O95749	300 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	PSAP	P07602	524 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	HSPA1A	P0DMV8	641 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	HSPA1B	P0DMV9	641 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	XRCC6	P12956	609 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CAPN2	P17655	700 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	SLC26A2	P50443	739 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	ACTR2	P61160	394 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	FAM160A1	Q05DH4	1040 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	ARHGAP1	Q07960	439 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CACNB2	Q08289	660 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	NFKBIB	Q15653	356 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	MIS18BP1	Q6P0N0	1132 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	ABHD15	Q6UXT9	468 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCDC73	Q6ZRK6	1079 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CYFIP1	Q7L576	1253 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	MIER3	Q7Z3K6	550 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	DHX37	Q8IY37	1157 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	ENGASE	Q8NFI3	743 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	SEPT1	Q8WYJ6	367 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CALML4	Q96GE6	196 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCDC34	Q96HJ3	373 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	ZFP91	Q96JP5	570 aa	Predicted RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	MMTAG2	Q9BU76	263 aa	Known RBP	13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	PDGFC	Q9NRA1	345 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	DISC1	Q9NRI5	854 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	STK17A	Q9UEE5	414 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	KCNH3	Q9ULD8	1083 aa		13.54	□□□□□ -0.24
HDLBP-215	ENST00000427487	PPFIA4	O75335	1185 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCNE2	O96020	404 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	PFKFB1	P16118	471 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	SMPD1	P17405	629 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	ADCYAP1R1	P41586	468 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	LY6K	Q17RY6	165 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	BRDT	Q58F21	947 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	CABP7	Q86V35	215 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	C4orf19	Q8IY42	314 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	FSIP1	Q8NA03	581 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	IQUB	Q8NA54	791 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	AFAP1L1	Q8TED9	768 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	ATP6V0A1	Q93050	837 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	EPSTI1	Q96J88	318 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	PRDM10	Q9NQV6	1147 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	DDX19A	Q9NUU7	478 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	TSKS	Q9UJT2	592 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	PPME1	Q9Y570	386 aa		13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	DDX49	Q9Y6V7	483 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-215	ENST00000427487	LOXHD1	Q8IVV2	1947 aa		13.52	□□□□□ -0.24
HDLBP-215	ENST00000427487		A6NJR5	290 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	EML1	O00423	815 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	KPNA6	O60684	536 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	GADD45B	O75293	160 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	LGR5	O75473	907 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SLITRK3	O94933	977 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	MYL1	P05976	194 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SUPT20HL2	P0C7V6	817 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SPATA31C1	P0DKV0	1188 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	PRKAR2A	P13861	404 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SYK	P43405	635 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	QARS	P47897	775 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	PSMC5	P62195	406 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SNW1	Q13573	536 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	KLHL40	Q2TBA0	621 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	TMEM119	Q4V9L6	283 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	NCAPH2	Q6IBW4	605 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	KANK3	Q6NY19	840 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	PLPPR4	Q7Z2D5	763 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	TRPV1	Q8NER1	839 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SNX29	Q8TEQ0	813 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	GJA10	Q969M2	543 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	SPATA33	Q96N06	139 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	GPR20	Q99678	358 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	UPF3A	Q9H1J1	476 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	ZSWIM4	Q9H7M6	989 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	PTCH2	Q9Y6C5	1203 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	EMSY	Q7Z589	1322 aa		13.52	□□□□□ -0.25
HDLBP-215	ENST00000427487	IGSF9B	Q9UPX0	1349 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	NOP56	O00567	594 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	ECM2	O94769	699 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	RARB	P10826	455 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	CST5	P28325	142 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	CCT6A	P40227	531 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	CPT1A	P50416	773 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	NDUFA8	P51970	172 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	GJA9	P57773	515 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	E2F4	Q16254	413 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	RRAGB	Q5VZM2	374 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	FAM160B1	Q5W0V3	765 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	TLK2	Q86UE8	772 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	CATSPER3	Q86XQ3	398 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	CDK5RAP3	Q96JB5	506 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	NACC1	Q96RE7	527 aa		13.51	□□□□□ -0.25
HDLBP-215	ENST00000427487	SPC25	Q9HBM1	224 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms