RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 KCNA6P17658 529 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 ETV3LQ6ZN32 361 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 SEC14L1Q92503 715 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 PPP1R14AQ96A00 147 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 DDX11Q96FC9 970 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 DHX57Q6P158 1386 aaKnown RBP7.94□□□□□ -1.14
C9orf3-205ENST00000427193 ARHGAP23Q9P227 1491 aa7.94□□□□□ -1.14
C9orf3-205ENST00000427193 EIF2AK4Q9P2K8 1649 aaKnown RBP7.93□□□□□ -1.14
C9orf3-205ENST00000427193 KIF3BO15066 747 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 C8BP07358 591 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 ATF4P18848 351 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-205ENST00000427193 SLC6A11P48066 632 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 FERMT3Q86UX7 667 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 MIB1Q86YT6 1006 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 NPLOC4Q8TAT6 608 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 FRS2Q8WU20 508 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 PRDM15P57071 1507 aaPredicted RBP7.93□□□□□ -1.14
C9orf3-205ENST00000427193 UNC13BO14795 1591 aa7.93□□□□□ -1.14
C9orf3-205ENST00000427193 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
C9orf3-205ENST00000427193 C22orf46C9J442 243 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 K7ESM1 405 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 RBM6P78332 1123 aaKnown RBP7.92□□□□□ -1.14
C9orf3-205ENST00000427193 INF2Q27J81 1249 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 E4F1Q66K89 784 aaPredicted RBP7.92□□□□□ -1.14
C9orf3-205ENST00000427193 ZNF761Q86XN6 746 aaPredicted RBP7.92□□□□□ -1.14
C9orf3-205ENST00000427193 RIOX2Q8IUF8 465 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 TEX2Q8IWB9 1127 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 GORASP1Q9BQQ3 440 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 AFF2P51816 1311 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 ABCC3O15438 1527 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 LMTK2Q8IWU2 1503 aa7.92□□□□□ -1.14
C9orf3-205ENST00000427193 SGSM2O43147 1006 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 CNR2P34972 360 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 GTF2A2P52657 109 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 RPL11P62913 178 aaKnown RBP7.91□□□□□ -1.14
C9orf3-205ENST00000427193 CYP4F3Q08477 520 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 SMAD4Q13485 552 aaKnown RBP7.91□□□□□ -1.14
C9orf3-205ENST00000427193 MROH9Q5TGP6 573 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 Q8N1Y9 231 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 C11orf84Q9BUA3 381 aaPredicted RBP7.91□□□□□ -1.14
C9orf3-205ENST00000427193 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 DUSP10Q9Y6W6 482 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 SLIT1O75093 1534 aa7.91□□□□□ -1.14
C9orf3-205ENST00000427193 SHPRHQ149N8 1683 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 MSH6P52701 1360 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 CLSPNQ9HAW4 1339 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 HOXC12P31275 282 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 ZC3H18Q86VM9 953 aaKnown RBP7.9□□□□□ -1.14
C9orf3-205ENST00000427193 KYQ8NBH2 561 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 ADAMTS17Q8TE56 1095 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 DDX1Q92499 740 aaKnown RBP7.9□□□□□ -1.14
C9orf3-205ENST00000427193 ACTR10Q9NZ32 417 aa7.9□□□□□ -1.14
C9orf3-205ENST00000427193 TIMM13Q9Y5L4 95 aaPredicted RBP7.9□□□□□ -1.14
C9orf3-205ENST00000427193 NKTRP30414 1462 aaKnown RBP7.89□□□□□ -1.15
C9orf3-205ENST00000427193 ERVK-7P63135 1459 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 UNCXA6NJT0 531 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 RPL13P26373 211 aaKnown RBP7.89□□□□□ -1.15
C9orf3-205ENST00000427193 THBS2P35442 1172 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 KCNAB2Q13303 367 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
C9orf3-205ENST00000427193 GGNQ86UU5 652 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 BTN2A2Q8WVV5 523 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 DIO2Q92813 273 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 LGR4Q9BXB1 951 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 CAPN10Q9HC96 672 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 NGRNQ9NPE2 291 aaKnown RBP7.89□□□□□ -1.15
C9orf3-205ENST00000427193 X6R8D5 127 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 UBR1Q8IWV7 1749 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 IQGAP3Q86VI3 1631 aa7.89□□□□□ -1.15
C9orf3-205ENST00000427193 ARHGAP31Q2M1Z3 1444 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 NUP155O75694 1391 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
C9orf3-205ENST00000427193 MYO1BO43795 1136 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 SCG5P05408 212 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 ZNF827Q17R98 1081 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 HHIPL2Q6UWX4 724 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 CD300LDQ6UXZ3 194 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 MILR1Q7Z6M3 343 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 FAM126BQ8IXS8 530 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 TTLL6Q8N841 843 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 MPHOSPH9Q99550 1183 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 PALD1Q9ULE6 856 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
C9orf3-205ENST00000427193 ANKRD30BQ9BXX2 1392 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
C9orf3-205ENST00000427193 CPP00450 1065 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 SSBP05455 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
C9orf3-205ENST00000427193 ITGAVP06756 1048 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 SNRPB2P08579 225 aaKnown RBP7.87□□□□□ -1.15
C9orf3-205ENST00000427193 FPR2P25090 351 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 TESK1Q15569 626 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 SV2CQ496J9 727 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 FAM26FQ5R3K3 315 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 ACBD5Q5T8D3 534 aaPredicted RBP7.87□□□□□ -1.15
C9orf3-205ENST00000427193 CEP68Q76N32 757 aa7.87□□□□□ -1.15
C9orf3-205ENST00000427193 ZNF227Q86WZ6 799 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms