RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 GPSM2P81274 684 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 PPFIBP2Q8ND30 876 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 SPZ1Q9BXG8 430 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
SP1-202ENST00000426431 FOXO4P98177 505 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.64
SP1-202ENST00000426431 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 VPS18Q9P253 973 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 DIS3Q9Y2L1 958 aaKnown RBP11.05□□□□□ -0.64
SP1-202ENST00000426431 RIMS1Q86UR5 1692 aaKnown RBP11.05□□□□□ -0.64
SP1-202ENST00000426431 RASSF2P50749 326 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 ZBED6P86452 979 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 ARL13BQ3SXY8 428 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 THEM5Q8N1Q8 247 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 KPNA2P52292 529 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 ASPHQ12797 758 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 CFAP57Q96MR6 1250 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 CLIC6Q96NY7 704 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 KRT15P19012 456 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 CSF1RP07333 972 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 ARL4AP40617 200 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 RESTQ13127 1097 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 MAPK6Q16659 721 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 SCYL2Q6P3W7 929 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 FAM84BQ96KN1 310 aaPredicted RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 PRDX5P30044 214 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 PPP4R1Q8TF05 950 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 TRERF1Q96PN7 1200 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 BARHL2Q9NY43 387 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 SMIM23A6NLE4 172 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 ELF1P32519 619 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 ETF1P62495 437 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 MTERF2Q49AM1 385 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 PBKQ96KB5 322 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 TDRD3Q9H7E2 651 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 CPSF3Q9UKF6 684 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 KCNK3O14649 394 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 PLCG1P19174 1290 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 SNRNP48Q6IEG0 339 aaKnown RBP11.04□□□□□ -0.64
SP1-202ENST00000426431 SAMD3Q8N6K7 520 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 FAM114A2Q9NRY5 505 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
SP1-202ENST00000426431 UBN2Q6ZU65 1347 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 PI16Q6UXB8 463 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 NDUFAF2Q8N183 169 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 STMN2Q93045 179 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 ATF2P15336 505 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 ABCB4P21439 1286 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 ENOSF1Q7L5Y1 443 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 PSPC1Q8WXF1 523 aaKnown RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 CARD6Q9BX69 1037 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 SERPINA10Q9UK55 444 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 USH1CQ9Y6N9 552 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 SERPING1P05155 500 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 TBC1D16Q8TBP0 767 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 PPARGP37231 505 aaPredicted RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 ADCY8P40145 1251 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 RHOT2Q8IXI1 618 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 KLHL7Q8IXQ5 586 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 URGCPQ8TCY9 931 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 CPS1P31327 1500 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 EFCAB8A8MWE9 144 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 TBXAS1P24557 533 aaPredicted RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 TBC1D10BQ4KMP7 808 aaPredicted RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 TRIM42Q8IWZ5 723 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 SIX6OS1Q8N1H7 587 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 MMP19Q99542 508 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 MSTO1Q9BUK6 570 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 VPS37BQ9H9H4 285 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 RNF40O75150 1001 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 TROVE2P10155 538 aaKnown RBP eCLIP11.03□□□□□ -0.64
SP1-202ENST00000426431 HSPA1LP34931 641 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 CATSPER4Q7RTX7 472 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 SPATS2Q86XZ4 545 aaKnown RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 ZMYND15Q9H091 742 aa11.03□□□□□ -0.64
SP1-202ENST00000426431 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
SP1-202ENST00000426431 EFNA5P52803 228 aa11.02□□□□□ -0.64
SP1-202ENST00000426431 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.64
SP1-202ENST00000426431 RESP18Q5W5W9 173 aa11.02□□□□□ -0.64
SP1-202ENST00000426431 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms