RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 SMTNP53814 917 aa16.5■□□□□ 0.23
SHISA9-201ENST00000423335 CTTNQ14247 550 aaKnown RBP16.5■□□□□ 0.23
SHISA9-201ENST00000423335 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
SHISA9-201ENST00000423335 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
SHISA9-201ENST00000423335 ZNF668Q96K58 619 aaPredicted RBP16.5■□□□□ 0.23
SHISA9-201ENST00000423335 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
SHISA9-201ENST00000423335 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
SHISA9-201ENST00000423335 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
SHISA9-201ENST00000423335 ECE1P42892 770 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 VGLL2Q8N8G2 317 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 IFT74Q96LB3 600 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 ELP3Q9H9T3 547 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 MYOZ2Q9NPC6 264 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 JRKLQ9Y4A0 524 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 SNRNP48Q6IEG0 339 aaKnown RBP16.49■□□□□ 0.23
SHISA9-201ENST00000423335 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 ADD3Q9UEY8 706 aaKnown RBP16.49■□□□□ 0.23
SHISA9-201ENST00000423335 PCDHA13Q9Y5I0 950 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 LGALS16A8MUM7 142 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 PRPHP41219 470 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 NAA25Q14CX7 972 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 NSRP1Q9H0G5 558 aaKnown RBP16.49■□□□□ 0.23
SHISA9-201ENST00000423335 STK36Q9NRP7 1315 aa16.49■□□□□ 0.23
SHISA9-201ENST00000423335 A0A1B0GTH6 734 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 MARK3P27448 753 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 NR1I3Q14994 352 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FAM178BQ8IXR5 827 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 RNF169Q8NCN4 708 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
SHISA9-201ENST00000423335 PTPAQ15257 358 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 NFRKBQ6P4R8 1299 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FHOD1Q9Y613 1164 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 NR2F2P24468 414 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 STAT1P42224 750 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 IFNAR2P48551 515 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 MAN2A1Q16706 1144 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 NT5C3AQ9H0P0 336 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.48■□□□□ 0.23
SHISA9-201ENST00000423335 TSKSQ9UJT2 592 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 GOLGA8KD6RF30 607 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FCER1AP12319 257 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 KRT5P13647 590 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 ASIC3Q9UHC3 531 aa16.48■□□□□ 0.23
SHISA9-201ENST00000423335 FMN2Q9NZ56 1722 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
SHISA9-201ENST00000423335 LRRIQ4A6NIV6 560 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 ACTN4O43707 911 aaKnown RBP16.47■□□□□ 0.23
SHISA9-201ENST00000423335 GYPCP04921 128 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 STAT3P40763 770 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
SHISA9-201ENST00000423335 NNTQ13423 1086 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 ODR4Q5SWX8 454 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 TEKT3Q9BXF9 490 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 AP1M1Q9BXS5 423 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 IMPG2Q9BZV3 1241 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 MTUS1Q9ULD2 1270 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
SHISA9-201ENST00000423335 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 CLIC2O15247 247 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 H2AFZP0C0S5 128 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 USP14P54578 494 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 GRM4Q14833 912 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 H2AFVQ71UI9 128 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 FBF1Q8TES7 1133 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 SYNCQ9H7C4 482 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 ARHGAP25P42331 645 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 SMARCAL1Q9NZC9 954 aa16.47■□□□□ 0.23
SHISA9-201ENST00000423335 EIF3CLB5ME19 914 aaKnown RBP16.46■□□□□ 0.23
SHISA9-201ENST00000423335 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 H2AFXP16104 143 aaPredicted RBP16.46■□□□□ 0.23
SHISA9-201ENST00000423335 EPHB4P54760 987 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 CCDC91Q7Z6B0 441 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 EIF3CQ99613 913 aaKnown RBP16.46■□□□□ 0.23
SHISA9-201ENST00000423335 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 PEAK1Q9H792 1746 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 KCNJ6P48051 423 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 RTFDC1Q9BY42 306 aaPredicted RBP16.46■□□□□ 0.23
SHISA9-201ENST00000423335 DDX4Q9NQI0 724 aaKnown RBP16.46■□□□□ 0.23
SHISA9-201ENST00000423335 RNF146Q9NTX7 359 aa16.46■□□□□ 0.23
SHISA9-201ENST00000423335 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms