RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PROM2Q8N271 834 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 FAM133AQ8N9E0 248 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 ACTRT1Q8TDG2 376 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 NOVA2Q9UNW9 492 aaKnown RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 ABCA3Q99758 1704 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 PALM3A6NDB9 673 aaPredicted RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 SART1O43290 800 aaKnown RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 ODF2Q5BJF6 829 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 UBLCP1Q8WVY7 318 aaPredicted RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 TAF4BQ92750 862 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 BTNL10A8MVZ5 291 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 GOLGA8HP0CJ92 632 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 NAPAP54920 295 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 RAPGEF1Q13905 1077 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 LRRC57Q8N9N7 239 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 TBCKQ8TEA7 893 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 DDX12PQ92771 950 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 MAGOHBQ96A72 148 aaKnown RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 TSG101Q99816 390 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 KANSL2Q9H9L4 492 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 MCM9Q9NXL9 1143 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 AIPL1Q9NZN9 384 aa13.92□□□□□ -0.18
CTCFL-204ENST00000422869 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.92□□□□□ -0.18
CTCFL-204ENST00000422869 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 MGRN1O60291 552 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 DRD4P21917 467 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 KLHL30Q0D2K2 578 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 KCNK18Q7Z418 384 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 DYNLL2Q96FJ2 89 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 CALR3Q96L12 384 aaKnown RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 DAPK3O43293 454 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 CEP104O60308 925 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 GCFC2P16383 781 aaKnown RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 KLRK1P26718 216 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 PRDX5P30044 214 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 PTPROQ16827 1216 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 GKAP1Q5VSY0 366 aaPredicted RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 RAD54LQ92698 747 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 PBKQ96KB5 322 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 NUDT12Q9BQG2 462 aa13.91□□□□□ -0.18
CTCFL-204ENST00000422869 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
CTCFL-204ENST00000422869 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 ATP2C2O75185 946 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 DNAJC8O75937 253 aaPredicted RBP13.9□□□□□ -0.18
CTCFL-204ENST00000422869 MTMR3Q13615 1198 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 E2F5Q15329 346 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 TLDC1Q6P9B6 456 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 HVCN1Q96D96 273 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 FAM212AQ96EL1 285 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 KDM4CQ9H3R0 1056 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
CTCFL-204ENST00000422869 TRAF5O00463 557 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 ITGA4P13612 1032 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.181e-6■■□□□ 13.1
CTCFL-204ENST00000422869 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 DNAAF5Q86Y56 855 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 TRIM59Q8IWR1 403 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 MYOCDQ8IZQ8 938 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 METTL13Q8N6R0 699 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 P3H4Q92791 437 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 GANQ9H2C0 597 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
CTCFL-204ENST00000422869 POTEMA6NI47 508 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 EVA1CP58658 441 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 PTK2Q05397 1052 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 PSMD2Q13200 908 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 ASIC2Q16515 512 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 C12orf60Q5U649 245 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 SEC14L1Q92503 715 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.192e-13■□□□□ 8.7
CTCFL-204ENST00000422869 ATP6V0A4Q9HBG4 840 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 F8VZ95 297 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 SLC37A4O43826 429 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 GHRP10912 638 aa13.89□□□□□ -0.19
CTCFL-204ENST00000422869 EZRP15311 586 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms