RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 FAM228BP0C875 321 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 KLHL30Q0D2K2 578 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 HGSNATQ68CP4 663 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 NOX5Q96PH1 765 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 ZNF76P36508 570 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
CTCFL-203ENST00000422109 KCNA1Q09470 495 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 GPATCH4Q5T3I0 446 aaKnown RBP15.17■□□□□ 0.02
CTCFL-203ENST00000422109 SFR1Q86XK3 245 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 TLR10Q9BXR5 811 aa15.17■□□□□ 0.02
CTCFL-203ENST00000422109 GOLGA6BA6NDN3 693 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 MYBP10242 640 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 NOP2P46087 812 aaKnown RBP15.16■□□□□ 0.02
CTCFL-203ENST00000422109 KCNH2Q12809 1159 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 ARSHQ5FYA8 562 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 KLHDC7AQ5VTJ3 777 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 GJB7Q6PEY0 223 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 CATSPER3Q86XQ3 398 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 PIGOQ8TEQ8 1089 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 LRRC27Q9C0I9 530 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 BCS1LQ9Y276 419 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 hCG_1984214I3L0E3 225 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 NT5C2P49902 561 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 GUCY2FP51841 1108 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 ARHGAP4P98171 946 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 ZYXQ15942 572 aaKnown RBP15.16■□□□□ 0.02
CTCFL-203ENST00000422109 IQCEQ6IPM2 695 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 C8orf74Q6P047 294 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 ZNF713Q8N859 430 aaPredicted RBP15.16■□□□□ 0.02
CTCFL-203ENST00000422109 EHD4Q9H223 541 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
CTCFL-203ENST00000422109 ZBTB39O15060 712 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 ICA1Q05084 483 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 PSMD2Q13200 908 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 TRADDQ15628 312 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 SPAG5Q96R06 1193 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 NT5C3AQ9H0P0 336 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
CTCFL-203ENST00000422109 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 NOVP48745 357 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 CDK17Q00537 523 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 CRAMP1Q96RY5 1269 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 BHMT2Q9H2M3 363 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 SWAP70Q9UH65 585 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 AFF2P51816 1311 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 CETN3O15182 167 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 MCM3P25205 808 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 HNRNPH3P31942 346 aaKnown RBP15.15■□□□□ 0.02
CTCFL-203ENST00000422109 CASP4P49662 377 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 PLS1Q14651 629 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
CTCFL-203ENST00000422109 RPGRIP1Q96KN7 1286 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 REEP2Q9BRK0 252 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
CTCFL-203ENST00000422109 TDRD3Q9H7E2 651 aaKnown RBP15.15■□□□□ 0.02
CTCFL-203ENST00000422109 CEP72Q9P209 647 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
CTCFL-203ENST00000422109 ADAMTSL1Q8N6G6 1762 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 SPDYE3A6NKU9 549 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 TMCO5BA8MYB1 307 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 FAM86B1E9PN63 330 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 F5H6K3 240 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 AGPSO00116 658 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 GCNT3O95395 438 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 TUBBP07437 444 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 FAM86B2P0C5J1 330 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 KLRC3Q07444 240 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 SEMA3FQ13275 785 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
CTCFL-203ENST00000422109 ASIC2Q16515 512 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 TSEN2Q8NCE0 465 aaKnown RBP15.14■□□□□ 0.01
CTCFL-203ENST00000422109 KRT12Q99456 494 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-203ENST00000422109 MEIS2O14770 477 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-203ENST00000422109 GUCY2DQ02846 1103 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-203ENST00000422109 HAUS3Q68CZ6 603 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 MED4Q9NPJ6 270 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.017e-7■■■■■ 79
CTCFL-203ENST00000422109 PKD2L1Q9P0L9 805 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 NFU1Q9UMS0 254 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 KDM3AQ9Y4C1 1321 aa15.14■□□□□ 0.01
CTCFL-203ENST00000422109 SERPING1P05155 500 aa15.13■□□□□ 0.01
CTCFL-203ENST00000422109 TCP1P17987 556 aaKnown RBP15.13■□□□□ 0.01
CTCFL-203ENST00000422109 ADRA2BP18089 450 aa15.13■□□□□ 0.01
CTCFL-203ENST00000422109 JAG1P78504 1218 aa15.13■□□□□ 0.01
CTCFL-203ENST00000422109 COBLL1Q53SF7 1204 aa15.13■□□□□ 0.01
CTCFL-203ENST00000422109 LRRC31Q6UY01 552 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms