RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PRPF4BQ13523 1007 aaKnown RBP14.72□□□□□ -0.05
MCF2L-213ENST00000421756 ARHGAP44Q17R89 818 aa14.72□□□□□ -0.05
MCF2L-213ENST00000421756 TBCAO75347 108 aaKnown RBP14.71□□□□□ -0.05
MCF2L-213ENST00000421756 ADRA2BP18089 450 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 SFMBT2Q5VUG0 894 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 PRAMEF18Q5VWM3 479 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 GUF1Q8N442 669 aaKnown RBP14.71□□□□□ -0.05
MCF2L-213ENST00000421756 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 RUSC1Q9BVN2 902 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 TMEM39BQ9GZU3 492 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 CUEDC2Q9H467 287 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 STK17AQ9UEE5 414 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 ROBO3Q96MS0 1386 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 MEIS2O14770 477 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 TRADDQ15628 312 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 LRRC55Q6ZSA7 311 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 SIAH1Q8IUQ4 282 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 FAM163AQ96GL9 167 aaPredicted RBP14.71□□□□□ -0.05
MCF2L-213ENST00000421756 FAM84AQ96KN4 292 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 PODXL2Q9NZ53 605 aa14.71□□□□□ -0.05
MCF2L-213ENST00000421756 ARAP2Q8WZ64 1704 aa14.71□□□□□ -0.06
MCF2L-213ENST00000421756 A0A087X0T9 212 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 FAM228BP0C875 321 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 BMP3P12645 472 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
MCF2L-213ENST00000421756 AMPD2Q01433 879 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 KIAA1755Q5JYT7 1200 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 FOXR1Q6PIV2 292 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TRAPPC11Q7Z392 1133 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 BANK1Q8NDB2 785 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 MASTLQ96GX5 879 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TRIM31Q9BZY9 425 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 CETN3O15182 167 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 LRRN2O75325 713 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 PALMO75781 387 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 KLRC1P26715 233 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 HOXA10P31260 410 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-213ENST00000421756 BRD3Q15059 726 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 ARSHQ5FYA8 562 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TTYH3Q9C0H2 523 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 SIK3Q9Y2K2 1263 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 SHTN1A0MZ66 631 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 TISP43B9A030 160 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 PDE6BP35913 854 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 PRKG1Q13976 671 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 SYDE2Q5VT97 1194 aa14.7□□□□□ -0.06
MCF2L-213ENST00000421756 SLC9C1Q4G0N8 1177 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 DYDC2Q96IM9 177 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 PURBQ96QR8 312 aaKnown RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 FAM204AQ9H8W3 233 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 L1RE1Q9UN81 338 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 BTAF1O14981 1849 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 EIF3CLB5ME19 914 aaKnown RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 FGFR1OPO95684 399 aaKnown RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 LARGE2Q8N3Y3 721 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 ALS2CR12Q96Q35 445 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 EIF3CQ99613 913 aaKnown RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 AP1M1Q9BXS5 423 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 SWAP70Q9UH65 585 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 HDAC9Q9UKV0 1011 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 PLAGL2Q9UPG8 496 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 AHDC1Q5TGY3 1603 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 MSH4O15457 936 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 FAM13AO94988 1023 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 KIF20AO95235 890 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 ARMCX3Q9UH62 379 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-213ENST00000421756 PRR12Q9ULL5 1215 aa14.69□□□□□ -0.06
MCF2L-213ENST00000421756 TMEM110-MUSTN1A8MSY1 372 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 TLR2O60603 784 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
MCF2L-213ENST00000421756 HLTFQ14527 1009 aaKnown RBP eCLIP14.68□□□□□ -0.06
MCF2L-213ENST00000421756 SYCP3Q8IZU3 236 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 RSPH14Q9UHP6 348 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC88AQ3V6T2 1871 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 PVALEFA0A1B0GWK0 134 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 GFPT2O94808 682 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 MYL1P05976 194 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 GGCXP38435 758 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 PAFAH1B1P43034 410 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 USP14P54578 494 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 ERGIC2Q96RQ1 377 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 OSBPL9Q96SU4 736 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 EHD4Q9H223 541 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 RBM12Q9NTZ6 932 aaKnown RBP14.68□□□□□ -0.06
MCF2L-213ENST00000421756 TMOD2Q9NZR1 351 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 ABCB11O95342 1321 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 SCN7AQ01118 1682 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 PDIA5Q14554 519 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 KRT12Q99456 494 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 FAM107BQ9H098 131 aa14.68□□□□□ -0.06
MCF2L-213ENST00000421756 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-213ENST00000421756 PSMD14O00487 310 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 KCNK3O14649 394 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 LRCH2Q5VUJ6 765 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 PDXDC1Q6P996 788 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms