RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 NME8Q8N427 588 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 CNOT6LQ96LI5 555 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 CACYBPQ9HB71 228 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 A6NNZ2 444 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 CELF2O95319 508 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 PSMD2Q13200 908 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 TUBB8Q3ZCM7 444 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 PALM2Q8IXS6 379 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 PARVGQ9HBI0 331 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 IPO11Q9UI26 975 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 SPDYE16A6NNV3 312 aaPredicted RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 CSF1RP07333 972 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 ANXA13P27216 316 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 UBE2SQ16763 222 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 SPDYE2Q495Y8 402 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 ABCB11O95342 1321 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 FDX1P10109 184 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 KRT15P19012 456 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 ADKP55263 362 aaKnown RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 KIF23Q02241 960 aaPredicted RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 SCARF1Q14162 830 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 FAM83BQ5T0W9 1011 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 SLFN12LQ6IEE8 588 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 USP50Q70EL3 339 aaPredicted RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 PRPF31Q8WWY3 499 aaKnown RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 HYOU1Q9Y4L1 999 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 UTYO14607 1347 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 THAP12O43422 761 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 IFNB1P01574 187 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 XPAP23025 273 aaPredicted RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 FOXO4P98177 505 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 MAP7Q14244 749 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 PDIA6Q15084 440 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 P2RX5Q93086 422 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 GCNAQ96QF7 691 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 PSMB7Q99436 277 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 SEPT10Q9P0V9 454 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 SAR1BQ9Y6B6 198 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 ZBTB5O15062 677 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.947e-8■■■■□ 24.4
UBR4-206ENST00000419533 CACNB3P54284 484 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 TFAMQ00059 246 aaKnown RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 PPP1R18Q6NYC8 613 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 KRT12Q99456 494 aa9.19□□□□□ -0.94
UBR4-206ENST00000419533 RPF1Q9H9Y2 349 aaKnown RBP9.19□□□□□ -0.94
UBR4-206ENST00000419533 PXDNLA1KZ92 1463 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 EIF3CLB5ME19 914 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 CYP2E1P05181 493 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 KRT10P13645 584 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 HOXA13P31271 388 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 HPDP32754 393 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 COPB1P53618 953 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 PPP2R5CQ13362 524 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 RCSD1Q6JBY9 416 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 FASTKD5Q7L8L6 764 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 BBOF1Q8ND07 529 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 EIF3CQ99613 913 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 MYOZ2Q9NPC6 264 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 UBN2Q6ZU65 1347 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 HOXA10P31260 410 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 ELF1P32519 619 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 HUNKP57058 714 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 TTC31Q49AM3 519 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 ZNF658Q5TYW1 1059 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 CCDC68Q9H2F9 335 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 SETD1AO15047 1707 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 SYNJ2BP-COX16A0A087WUM0 186 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 MEIS1O00470 390 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 KCNK3O14649 394 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 PLA2G4BP0C869 781 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 PRDX5P30044 214 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 BFSP1Q12934 665 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 DENND2CQ68D51 928 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 SNRNP48Q6IEG0 339 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 NSUN6Q8TEA1 469 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 RUNDC3BQ96NL0 473 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 TUBGCP2Q9BSJ2 902 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 CARD6Q9BX69 1037 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 GGA3Q9NZ52 723 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 MAN1A1P33908 653 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 ADCY8P40145 1251 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 ARL6IP4Q66PJ3 421 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 ZBTB33Q86T24 672 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 RGS17Q9UGC6 210 aaPredicted RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 KRIT1O00522 736 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 SLFN14P0C7P3 912 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 SRGAP2BP0DMP2 458 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 FKBP3Q00688 224 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 WHAMMP3Q1A5X7 153 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 CTAGE3PQ8IX95 158 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 HAUS4Q9H6D7 363 aa9.18□□□□□ -0.94
UBR4-206ENST00000419533 TYW1Q9NV66 732 aaKnown RBP9.18□□□□□ -0.94
UBR4-206ENST00000419533 FANCLQ9NW38 375 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms