RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 C17orf102A2RUQ5 167 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 C2CD4DB7Z1M9 353 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
DDX39B-204ENST00000418897 STK25O00506 426 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 GPAA1O43292 621 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 PPFIA4O75335 1185 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 APPP05067 770 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 HOXC8P31273 242 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 LAMC2Q13753 1193 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 DUSP6Q16828 381 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 CES5AQ6NT32 575 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 ITPRIPQ8IWB1 547 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 DCAF4Q8WV16 495 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 APOL5Q9BWW9 433 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 MRPL42Q9Y6G3 142 aaKnown RBP14.03□□□□□ -0.16
DDX39B-204ENST00000418897 FRMPD2Q68DX3 1309 aaPredicted RBP14.03□□□□□ -0.16
DDX39B-204ENST00000418897 MYH7P12883 1935 aa14.03□□□□□ -0.16
DDX39B-204ENST00000418897 DCDC2BA2VCK2 349 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 M0R2C6 588 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 DGKIO75912 1065 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 NPR3P17342 541 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 COL9A3Q14050 684 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-204ENST00000418897 HSDL1Q3SXM5 330 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 MYSM1Q5VVJ2 828 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 PDE12Q6L8Q7 609 aaKnown RBP14.02□□□□□ -0.17
DDX39B-204ENST00000418897 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-204ENST00000418897 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
DDX39B-204ENST00000418897 LIMD1Q9UGP4 676 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 FBXL21Q9UKT6 434 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDX39B-204ENST00000418897 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.17
DDX39B-204ENST00000418897 CHRNA1P02708 482 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 ASGR2P07307 311 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 UBE3AQ05086 875 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 PPARAQ07869 468 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 STXBP2Q15833 593 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 TPRNQ4KMQ1 711 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 SYCE2Q6PIF2 218 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 SIRT2Q8IXJ6 389 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
DDX39B-204ENST00000418897 ZDHHC14Q8IZN3 488 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 SECISBP2LQ93073 1101 aaKnown RBP14.01□□□□□ -0.17
DDX39B-204ENST00000418897 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 NCDNQ9UBB6 729 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 CDH22Q9UJ99 828 aa14.01□□□□□ -0.17
DDX39B-204ENST00000418897 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
DDX39B-204ENST00000418897 USP24Q9UPU5 2620 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
DDX39B-204ENST00000418897 SMIM10L2AP0DMW4 78 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 SMIM10L2BP0DMW5 78 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 RFX1P22670 979 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 SP2Q02086 613 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 LMNB2Q03252 620 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 KCNC3Q14003 757 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
DDX39B-204ENST00000418897 CRIPAKQ8N1N5 446 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
DDX39B-204ENST00000418897 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
DDX39B-204ENST00000418897 APPBP2Q92624 585 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 BORCS6Q96GS4 357 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 EHMT1Q9H9B1 1298 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 TTC3P53804 2025 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
DDX39B-204ENST00000418897 OTOGLQ3ZCN5 2332 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 EIF3JO75822 258 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 GNAT1P11488 350 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 HOXB3P14651 431 aaPredicted RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 ITIH3Q06033 890 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 USH1GQ495M9 461 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 VARS2Q5ST30 1063 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 CELF3Q5SZQ8 465 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 TDRD5Q8NAT2 981 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 IWS1Q96ST2 819 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
DDX39B-204ENST00000418897 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 PCDHB12Q9Y5F1 795 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 MRVI1Q9Y6F6 885 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 FAM208BQ5VWN6 2430 aa13.99□□□□□ -0.17
DDX39B-204ENST00000418897 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 H3BRB1 525 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 NR3C2P08235 984 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 GHRP10912 638 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 GNAT2P19087 354 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 EIF2AK2P19525 551 aaKnown RBP13.98□□□□□ -0.17
DDX39B-204ENST00000418897 MTHFRP42898 656 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 LPIN1Q14693 890 aa13.98□□□□□ -0.17
DDX39B-204ENST00000418897 LLGL2Q6P1M3 1020 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms